RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TTC21AQ8NDW8 1320 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 SBNO2Q9Y2G9 1366 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 IARSP41252 1262 aaKnown RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 RPGRIP1LQ68CZ1 1315 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 CCT6AP40227 531 aaKnown RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 SP4Q02446 784 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 NUDT16Q96DE0 195 aaKnown RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 RNF41Q9H4P4 317 aaPredicted RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 RARSP54136 660 aaKnown RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 ATP11AP98196 1134 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 SREK1Q8WXA9 508 aaKnown RBP8.94□□□□□ -0.98
CIITA-201ENST00000324288 NAIPQ13075 1403 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 PICALMQ13492 652 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 MAP7D1Q3KQU3 841 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 TMX3Q96JJ7 454 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 FCHSD2O94868 740 aa8.94□□□□□ -0.98
CIITA-201ENST00000324288 KLHL40Q2TBA0 621 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 MGARPQ8TDB4 240 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 A0A1B0GUA9 196 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 PKD2L1Q9P0L9 805 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.93□□□□□ -0.98
CIITA-201ENST00000324288 THEMISQ8N1K5 641 aaPredicted RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 DACT1Q9NYF0 836 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 TRIM68Q6AZZ1 485 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 ANKLE2Q86XL3 938 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 RIPOR2Q9Y4F9 1068 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 PPP1R9BQ96SB3 815 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 OAS2P29728 719 aaKnown RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 AMPD3Q01432 767 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 UTP14CQ5TAP6 766 aaKnown RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 B4GALNT4Q76KP1 1039 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 PPFIBP2Q8ND30 876 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 SPAG5Q96R06 1193 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 TSPY3P0CV98 308 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 TSPY8P0CW00 308 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 STK38LQ9Y2H1 464 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 NKTRP30414 1462 aaKnown RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 KLF18A0A0U1RQI7 1052 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
CIITA-201ENST00000324288 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 EMILIN1Q9Y6C2 1016 aa8.93□□□□□ -0.98
CIITA-201ENST00000324288 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
CIITA-201ENST00000324288 UTP14AQ9BVJ6 771 aaKnown RBP8.92□□□□□ -0.98
CIITA-201ENST00000324288 HSPA1LP34931 641 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 CHST3Q7LGC8 479 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 NDC80O14777 642 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 SETSIPP0DME0 302 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 ERICH3Q5RHP9 1530 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 GDAP1L1Q96MZ0 367 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 PDE4BQ07343 736 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 STXBP4Q6ZWJ1 553 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 CTNND2Q9UQB3 1225 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 GBP7Q8N8V2 638 aaPredicted RBP8.92□□□□□ -0.98
CIITA-201ENST00000324288 ERMNQ8TAM6 284 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
CIITA-201ENST00000324288 NKIRAS1Q9NYS0 192 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 USH1CQ9Y6N9 552 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 DTNBO60941 627 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 CFAP157Q5JU67 520 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 NDUFAB1O14561 156 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 MAP3K9P80192 1104 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 PPP1R7Q15435 360 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 LRCH2Q5VUJ6 765 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 EPSTI1Q96J88 318 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 KIAA1107Q9UPP5 1409 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 LCA5Q86VQ0 697 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 FAM200AQ8TCP9 573 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 PFDN4Q9NQP4 134 aa8.92□□□□□ -0.98
CIITA-201ENST00000324288 GCKP35557 465 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 WTAPQ15007 396 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 Q6ZUG5 572 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 PPP1R42Q7Z4L9 355 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 MAP2K2P36507 400 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 ARHGEF2Q92974 986 aaKnown RBP8.91□□□□□ -0.98
CIITA-201ENST00000324288 SDSP20132 328 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 IFI16Q16666 785 aaKnown RBP8.91□□□□□ -0.98
CIITA-201ENST00000324288 GSDMBQ8TAX9 411 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 GBP5Q96PP8 586 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 HLA-DOAP06340 250 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 CACNA2D3Q8IZS8 1091 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 UIMC1Q96RL1 719 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 SWAP70Q9UH65 585 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 SETDB1Q15047 1291 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 HARSP12081 509 aaKnown RBP8.91□□□□□ -0.98
CIITA-201ENST00000324288 TTC22Q5TAA0 569 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 NBPF6Q5VWK0 638 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 NBPF5PQ86XG9 351 aaPredicted RBP8.91□□□□□ -0.98
CIITA-201ENST00000324288 EVI5LQ96CN4 794 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 NBPF4Q96M43 638 aa8.91□□□□□ -0.98
CIITA-201ENST00000324288 TRIM31Q9BZY9 425 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms