RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-201ENST00000323959 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
CSTF3-201ENST00000323959 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
CSTF3-201ENST00000323959 PTPN18Q99952 460 aa9.12□□□□□ -0.95
CSTF3-201ENST00000323959 C11orf49Q9H6J7 331 aa9.12□□□□□ -0.95
CSTF3-201ENST00000323959 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-201ENST00000323959 MYPNQ86TC9 1320 aa9.11□□□□□ -0.95
CSTF3-201ENST00000323959 BMP1P13497 986 aa9.11□□□□□ -0.95
CSTF3-201ENST00000323959 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-201ENST00000323959 ANGEL1Q9UNK9 670 aaKnown RBP9.11□□□□□ -0.95
CSTF3-201ENST00000323959 RTL9Q8NET4 1388 aa9.11□□□□□ -0.95
CSTF3-201ENST00000323959 PI4K2BG5E9Z4 385 aa9.11□□□□□ -0.95
CSTF3-201ENST00000323959 APOBEC3FQ8IUX4 373 aaKnown RBP9.11□□□□□ -0.95
CSTF3-201ENST00000323959 ANKRD36CQ5JPF3 1778 aa9.11□□□□□ -0.95
CSTF3-201ENST00000323959 KRT37O76014 449 aa9.1□□□□□ -0.95
CSTF3-201ENST00000323959 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
CSTF3-201ENST00000323959 RANBP2P49792 3224 aaKnown RBP9.1□□□□□ -0.95
CSTF3-201ENST00000323959 TLR2O60603 784 aa9.1□□□□□ -0.95
CSTF3-201ENST00000323959 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
CSTF3-201ENST00000323959 LTBP2Q14767 1821 aa9.1□□□□□ -0.95
CSTF3-201ENST00000323959 MYOZ2Q9NPC6 264 aa9.09□□□□□ -0.95
CSTF3-201ENST00000323959 MAST2Q6P0Q8 1798 aa9.09□□□□□ -0.95
CSTF3-201ENST00000323959 OSBPP22059 807 aa9.09□□□□□ -0.95
CSTF3-201ENST00000323959 ARHGAP39Q9C0H5 1083 aa9.09□□□□□ -0.95
CSTF3-201ENST00000323959 ZNF330Q9Y3S2 320 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-201ENST00000323959 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 FBXL18Q96ME1 805 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-201ENST00000323959 PPP2R3BQ9Y5P8 575 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-201ENST00000323959 SLC39A6Q13433 755 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 DEFB118Q96PH6 123 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 EYA3Q99504 573 aa9.08□□□□□ -0.96
CSTF3-201ENST00000323959 ECE2O60344 883 aa9.07□□□□□ -0.96
CSTF3-201ENST00000323959 RSBN1LQ6PCB5 846 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-201ENST00000323959 GTF2A2P52657 109 aa9.07□□□□□ -0.96
CSTF3-201ENST00000323959 EIF4A2Q14240 407 aaKnown RBP9.07□□□□□ -0.96
CSTF3-201ENST00000323959 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-201ENST00000323959 GJA5P36382 358 aa9.07□□□□□ -0.96
CSTF3-201ENST00000323959 DIS3LQ8TF46 1054 aaKnown RBP9.07□□□□□ -0.96
CSTF3-201ENST00000323959 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-201ENST00000323959 ABCC4O15439 1325 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 ROCK2O75116 1388 aaKnown RBP9.06□□□□□ -0.96
CSTF3-201ENST00000323959 BDP1A6H8Y1 2624 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 LRRC37A2A6NM11 1700 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 RNMTO43148 476 aaKnown RBP9.06□□□□□ -0.96
CSTF3-201ENST00000323959 MGAMO43451 1857 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 PSMC4P43686 418 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
CSTF3-201ENST00000323959 MS4A4AQ96JQ5 239 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 USP17L8P0C7I0 530 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 IRF5Q13568 498 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 GMLQ99445 158 aa9.06□□□□□ -0.96
CSTF3-201ENST00000323959 FAM86C2PA6NEL3 165 aa9.05□□□□□ -0.96
CSTF3-201ENST00000323959 INHAP05111 366 aa9.05□□□□□ -0.96
CSTF3-201ENST00000323959 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
CSTF3-201ENST00000323959 BRI3BPQ8WY22 251 aa9.05□□□□□ -0.96
CSTF3-201ENST00000323959 SIPA1L3O60292 1781 aaPredicted RBP9.05□□□□□ -0.96
CSTF3-201ENST00000323959 TCERG1O14776 1098 aaKnown RBP9.05□□□□□ -0.96
CSTF3-201ENST00000323959 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 GRIN2CQ14957 1233 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 C17orf99Q6UX52 265 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.96
CSTF3-201ENST00000323959 DBNDD1Q9H9R9 158 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 OTOFQ9HC10 1997 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 CCL15-CCL14A0A0B4J2E2 113 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
CSTF3-201ENST00000323959 CCL15Q16663 113 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 PRAMEF18Q5VWM3 479 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 MTMR14Q8NCE2 650 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 CLMNQ96JQ2 1002 aa9.04□□□□□ -0.96
CSTF3-201ENST00000323959 COL4A1P02462 1669 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 ADCY3O60266 1144 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 FCGRTP55899 365 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 ACAP1Q15027 740 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
CSTF3-201ENST00000323959 SLC51AQ86UW1 340 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 NLRP3Q96P20 1036 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 PRRX2Q99811 253 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 A1BGP04217 495 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 PTPN5P54829 565 aa9.03□□□□□ -0.96
CSTF3-201ENST00000323959 BAHCC1Q9P281 2608 aa9.02□□□□□ -0.96
CSTF3-201ENST00000323959 SLC10A5Q5PT55 438 aa9.02□□□□□ -0.96
CSTF3-201ENST00000323959 NCOR1O75376 2440 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 FAM177BA6PVY3 158 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 SUPT20HL1Q3ZLR7 823 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 NUP98P52948 1817 aa9.02□□□□□ -0.97
CSTF3-201ENST00000323959 ERVV-1B6SEH8 477 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 GRAPQ13588 217 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 PRKG1Q13976 671 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 SHHQ15465 462 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 POTEEQ6S8J3 1075 aa9.01□□□□□ -0.97
CSTF3-201ENST00000323959 GRAPLQ8TC17 118 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-201ENST00000323959 ECM29Q5VYK3 1845 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms