RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 M0R2C6 588 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 SLFNL1Q499Z3 407 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 NAA16Q6N069 864 aaPredicted RBP18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 OSBP2Q969R2 916 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 SLC4A9Q96Q91 983 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 CTNNA3Q9UI47 895 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
SMARCD2-202ENST00000323347 OFD1O75665 1012 aa18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 ADORA1P30542 326 aa18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 NSUN7Q8NE18 718 aaKnown RBP18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 LEO1Q8WVC0 666 aaPredicted RBP18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 COL22A1Q8NFW1 1626 aaPredicted RBP18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 HLFQ16534 295 aa18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 SALL1Q9NSC2 1324 aa18.66■□□□□ 0.58
SMARCD2-202ENST00000323347 FOXP2O15409 715 aa18.65■□□□□ 0.58
SMARCD2-202ENST00000323347 RBM43Q6ZSC3 357 aaKnown RBP18.65■□□□□ 0.58
SMARCD2-202ENST00000323347 APPBP2Q92624 585 aa18.65■□□□□ 0.58
SMARCD2-202ENST00000323347 CTDNEP1O95476 244 aa18.64■□□□□ 0.58
SMARCD2-202ENST00000323347 HSP90B1P14625 803 aaKnown RBP18.64■□□□□ 0.58
SMARCD2-202ENST00000323347 FAM173BQ6P4H8 233 aa18.64■□□□□ 0.58
SMARCD2-202ENST00000323347 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.58
SMARCD2-202ENST00000323347 KIF3AQ9Y496 699 aa18.64■□□□□ 0.58
SMARCD2-202ENST00000323347 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 CTSWP56202 376 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 GORABQ5T7V8 394 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 ATL3Q6DD88 541 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 VGLL2Q8N8G2 317 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 SPATA32Q96LK8 384 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 AK7Q96M32 723 aa18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.57
SMARCD2-202ENST00000323347 KDM4AO75164 1064 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 TERF1P54274 439 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 FKBP4Q02790 459 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 SCARF1Q14162 830 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 WDR19Q8NEZ3 1342 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
SMARCD2-202ENST00000323347 CCDC192P0DO97 292 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 LIG1P18858 919 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ITGA6P23229 1130 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 PDIA3P30101 505 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 CFAP45Q9UL16 551 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 LRP5O75197 1615 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ATRNO75882 1429 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 A0A0G2JLW4 131 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 EXOC5O00471 708 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ZAP70P43403 619 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 FGD1P98174 961 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 APOBRQ0VD83 1088 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 ZNF34Q8IZ26 560 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 NUP62CLQ9H1M0 184 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 WNK3Q9BYP7 1800 aa18.62■□□□□ 0.57
SMARCD2-202ENST00000323347 COL16A1Q07092 1604 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 AHDC1Q5TGY3 1603 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 H3BQV1 296 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 PDE8AO60658 829 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 MAP3K11Q16584 847 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 UPF1Q92900 1129 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 NAP1L5Q96NT1 182 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 GREM2Q9H772 168 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 TFIP11Q9UBB9 837 aaKnown RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 PTPDC1A2A3K4 754 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 IRS4O14654 1257 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 IMMTQ16891 758 aaKnown RBP18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 METTL24Q5JXM2 366 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 SYNE4Q8N205 404 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 RCOR1Q9UKL0 485 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 ZBTB1Q9Y2K1 713 aa18.61■□□□□ 0.57
SMARCD2-202ENST00000323347 MYH3P11055 1940 aa18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 AKAP11Q9UKA4 1901 aa18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 FGAP02671 866 aa18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
SMARCD2-202ENST00000323347 DDX60Q8IY21 1712 aaKnown RBP18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 NUP98P52948 1817 aa18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 PDE8BO95263 885 aa18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 ADCY5O95622 1261 aa18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 MB21D2Q8IYB1 491 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.579e-8■■□□□ 14.4
SMARCD2-202ENST00000323347 USP25Q9UHP3 1055 aa18.59■□□□□ 0.57
SMARCD2-202ENST00000323347 GPTP24298 496 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms