RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 RUFY3Q7L099 469 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 NAP1L5Q96NT1 182 aaPredicted RBP10.9□□□□□ -0.66
CD46-202ENST00000322918 TFCP2L1Q9NZI6 479 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.67
CD46-202ENST00000322918 RNF113AO15541 343 aaKnown RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 NCLP19338 710 aaKnown RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 MCM4P33991 863 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 ANAPC15P60006 121 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 PIH1D3Q9NQM4 214 aaKnown RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 APBA3O96018 575 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 SLC5A1P13866 664 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 KLRK1P26718 216 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 FOSBP53539 338 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 HSP90AA2PQ14568 343 aaPredicted RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 MCTP1Q6DN14 999 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 TPTE2Q6XPS3 522 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 MAST3O60307 1309 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 CYP21A2P08686 494 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
CD46-202ENST00000322918 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 MSL1Q68DK7 614 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 BLOC1S2Q6QNY1 142 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 RAB11FIP4Q86YS3 637 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 VGLL2Q8N8G2 317 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 LPIN2Q92539 896 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 WWC3Q9ULE0 1092 aa10.89□□□□□ -0.67
CD46-202ENST00000322918 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 NFIXQ14938 502 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 CLEC4GQ6UXB4 293 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 CDC5LQ99459 802 aaKnown RBP10.88□□□□□ -0.67
CD46-202ENST00000322918 CNTNAP4Q9C0A0 1308 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 CHAF1AQ13111 956 aaPredicted RBP10.88□□□□□ -0.67
CD46-202ENST00000322918 HMG20BQ9P0W2 317 aa10.88□□□□□ -0.67
CD46-202ENST00000322918 KDM4AO75164 1064 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 HSPD1P10809 573 aaKnown RBP10.87□□□□□ -0.67
CD46-202ENST00000322918 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 MAGEB6Q8N7X4 407 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 LRP2BPQ9P2M1 347 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 TAF1P21675 1872 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 MROH5Q6ZUA9 1318 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 MED23Q9ULK4 1368 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 CNBD1Q8NA66 436 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 SPATA5Q8NB90 893 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 GDPD2Q9HCC8 539 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 ANKIB1Q9P2G1 1089 aa10.87□□□□□ -0.67
CD46-202ENST00000322918 ZNF532Q9HCE3 1301 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 DDIT3P35638 169 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 RAB3GAP1Q15042 981 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 GPAA1O43292 621 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
CD46-202ENST00000322918 PROM2Q8N271 834 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 TPCN1Q9ULQ1 816 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 MINPP1Q9UNW1 487 aa10.86□□□□□ -0.67
CD46-202ENST00000322918 BTAF1O14981 1849 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 ONECUT3O60422 494 aaPredicted RBP10.85□□□□□ -0.67
CD46-202ENST00000322918 ME3Q16798 604 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 TTC14Q96N46 770 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 NEK1Q96PY6 1258 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
CD46-202ENST00000322918 TOMM22Q9NS69 142 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 PODXL2Q9NZ53 605 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 RAI14Q9P0K7 980 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 DENND2AQ9ULE3 1009 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 ATRNO75882 1429 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 TRAK2O60296 914 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 RC3H1Q5TC82 1133 aaKnown RBP10.85□□□□□ -0.67
CD46-202ENST00000322918 BRF1Q92994 677 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.85□□□□□ -0.671e-6■■□□□ 12.5
CD46-202ENST00000322918 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 COL4A1P02462 1669 aa10.85□□□□□ -0.67
CD46-202ENST00000322918 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
CD46-202ENST00000322918 PSMA5P28066 241 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 Q6ZUG5 572 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 DDX11Q96FC9 970 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 NYXQ9GZU5 481 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 ARMT1Q9H993 441 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 ZNF219Q9P2Y4 722 aaPredicted RBP10.84□□□□□ -0.67
CD46-202ENST00000322918 SMC3Q9UQE7 1217 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 U3KPZ7 1027 aaPredicted RBP10.84□□□□□ -0.67
CD46-202ENST00000322918 FGAP02671 866 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 PDE6AP16499 860 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 MCM2P49736 904 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 CCT2P78371 535 aaKnown RBP10.84□□□□□ -0.67
CD46-202ENST00000322918 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
CD46-202ENST00000322918 HELLSQ9NRZ9 838 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms