RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 VIL1P09327 827 aaKnown RBP18.33■□□□□ 0.52
TUBA3D-201ENST00000321253 USP17L1Q7RTZ2 530 aa18.33■□□□□ 0.52
TUBA3D-201ENST00000321253 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
TUBA3D-201ENST00000321253 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 SNAP23O00161 211 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 RSBN1LQ6PCB5 846 aaPredicted RBP18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 FBXW7Q969H0 707 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
TUBA3D-201ENST00000321253 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
TUBA3D-201ENST00000321253 C15orf52Q6ZUT6 534 aaKnown RBP18.31■□□□□ 0.52
TUBA3D-201ENST00000321253 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
TUBA3D-201ENST00000321253 DZIP1LQ8IYY4 767 aaKnown RBP18.31■□□□□ 0.52
TUBA3D-201ENST00000321253 PSME4Q14997 1843 aa18.31■□□□□ 0.52
TUBA3D-201ENST00000321253 UBE4AQ14139 1066 aa18.3■□□□□ 0.52
TUBA3D-201ENST00000321253 MAP1SQ66K74 1059 aaPredicted RBP18.3■□□□□ 0.52
TUBA3D-201ENST00000321253 AGBL3Q8NEM8 1001 aa18.3■□□□□ 0.52
TUBA3D-201ENST00000321253 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
TUBA3D-201ENST00000321253 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
TUBA3D-201ENST00000321253 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
TUBA3D-201ENST00000321253 ZNF609O15014 1411 aa18.29■□□□□ 0.52
TUBA3D-201ENST00000321253 IRS2Q9Y4H2 1338 aa18.29■□□□□ 0.52
TUBA3D-201ENST00000321253 EYA2O00167 538 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 GNAI2P04899 355 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 PTPN12Q05209 780 aaKnown RBP18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 STRIP1Q5VSL9 837 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 TRPM4Q8TD43 1214 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 CD209Q9NNX6 404 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 TBC1D10BQ4KMP7 808 aaPredicted RBP18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 TTLL5Q6EMB2 1281 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
TUBA3D-201ENST00000321253 MYO3BQ8WXR4 1341 aa18.27■□□□□ 0.52
TUBA3D-201ENST00000321253 PDE8BO95263 885 aa18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 DACT2Q5SW24 774 aa18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 SIL1Q9H173 461 aa18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 FBXO3Q9UK99 471 aa18.27■□□□□ 0.51
TUBA3D-201ENST00000321253 PASKQ96RG2 1323 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 CEP350Q5VT06 3117 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 USP17L8P0C7I0 530 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 MS4A1P11836 297 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 GTF2IP78347 998 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 HTRA3P83110 453 aa18.26■□□□□ 0.51
TUBA3D-201ENST00000321253 CIAO1O76071 339 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 RLBP1P12271 317 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 IL1R1P14778 569 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 VPS37DQ86XT2 251 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 GMLQ99445 158 aa18.25■□□□□ 0.51
TUBA3D-201ENST00000321253 HIBADHP31937 336 aaKnown RBP18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 GYG1P46976 350 aa18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 MTX1Q13505 466 aa18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 CAVIN4Q5BKX8 364 aa18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 MXD3Q9BW11 206 aa18.24■□□□□ 0.51
TUBA3D-201ENST00000321253 EGFRP00533 1210 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 CEP126Q9P2H0 1117 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 PA2G4Q9UQ80 394 aaKnown RBP18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 IL15P40933 162 aaPredicted RBP18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 ATG9AQ7Z3C6 839 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 FAM84BQ96KN1 310 aaPredicted RBP18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
TUBA3D-201ENST00000321253 ZNF646O15015 1829 aaPredicted RBP18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 TMEM88BA6NKF7 163 aa18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 SLC5A1P13866 664 aa18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 PANK1Q8TE04 598 aa18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
TUBA3D-201ENST00000321253 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 SASH1O94885 1247 aa18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 MMP14P50281 582 aa18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 KIAA0825Q8IV33 1275 aa18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 LPIN2Q92539 896 aa18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 DCPSQ96C86 337 aaKnown RBP18.21■□□□□ 0.51
TUBA3D-201ENST00000321253 TRAF5O00463 557 aa18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 ZBTB7BO15156 539 aaPredicted RBP18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 FGFR2P21802 821 aa18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 GLIS2Q9BZE0 524 aaPredicted RBP18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
TUBA3D-201ENST00000321253 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 ATP2B3Q16720 1220 aa18.19■□□□□ 0.5
TUBA3D-201ENST00000321253 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms