RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 ATRIPQ8WXE1 791 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 VWA3AA6NCI4 1184 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 C8orf34Q49A92 452 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 SMARCC2Q8TAQ2 1214 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 TBCAO75347 108 aaKnown RBP10.08□□□□□ -0.8
SSBP2-201ENST00000320672 PDE4BQ07343 736 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 ALDH1L2Q3SY69 923 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 GSTA5Q7RTV2 222 aa10.08□□□□□ -0.8
SSBP2-201ENST00000320672 MXRA7P84157 204 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 RDH13Q8NBN7 331 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 A0A087WWV3 80 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 MBD4O95243 580 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 SYT1P21579 422 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 MCM5P33992 734 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 USH1GQ495M9 461 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 FAM47AQ5JRC9 791 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 CDC5LQ99459 802 aaKnown RBP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 UTP14AQ9BVJ6 771 aaKnown RBP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 PAG1Q9NWQ8 432 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 A0A1W2PRG0 241 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 CEP63Q96MT8 703 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 CRNKL1Q9BZJ0 848 aaKnown RBP10.07□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 GOLGA6L7A0A1B0GV03 622 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 PHKBQ93100 1093 aa10.07□□□□□ -0.8
SSBP2-201ENST00000320672 PTPDC1A2A3K4 754 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 GADD45BO75293 160 aaPredicted RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 AMOTQ4VCS5 1084 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 KCNQ3O43525 872 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 NELFCDQ8IXH7 590 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 BLZF1Q9H2G9 400 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 KCNJ14Q9UNX9 436 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 CTNND2Q9UQB3 1225 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 NKTRP30414 1462 aaKnown RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 PPP1R14CQ8TAE6 165 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 UBXN1Q04323 297 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 CREB3L3Q68CJ9 461 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 EYA1Q99502 592 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 GRM8O00222 908 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 LRMPQ12912 555 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC174Q6PII3 467 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 PPP1R21Q6ZMI0 780 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
SSBP2-201ENST00000320672 DBNDD2Q9BQY9 259 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 RPGRIP1LQ68CZ1 1315 aa10.06□□□□□ -0.8
SSBP2-201ENST00000320672 HLA-DOAP06340 250 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 KCNK9Q9NPC2 374 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 VPS18Q9P253 973 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 F13A1P00488 732 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 LRSAM1Q6UWE0 723 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 MYCLP12524 364 aaPredicted RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 NKX1-1Q15270 411 aaPredicted RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 RASA3Q14644 834 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 PIK3AP1Q6ZUJ8 805 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC91Q7Z6B0 441 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 SEC62Q99442 399 aaKnown RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 ST5P78524 1137 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 POLKQ9UBT6 870 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 TTC21BQ7Z4L5 1316 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 BAG3O95817 575 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC150Q8NCX0 1101 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 BIN2Q9UBW5 565 aaPredicted RBP10.05□□□□□ -0.8
SSBP2-201ENST00000320672 GNPATO15228 680 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 TXKP42681 527 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 RBSNQ9H1K0 784 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 ZNF287Q9HBT7 754 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 ABCC5O15440 1437 aa10.05□□□□□ -0.8
SSBP2-201ENST00000320672 CCDC160A6NGH7 325 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 KRT5P13647 590 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 CETN2P41208 172 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 DESP17661 470 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 GRIPAP1Q4V328 841 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.04□□□□□ -0.8
SSBP2-201ENST00000320672 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
SSBP2-201ENST00000320672 UBE2HP62256 183 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
SSBP2-201ENST00000320672 GOLGA8FQ08AF8 430 aa10.04□□□□□ -0.8
SSBP2-201ENST00000320672 GOLGA8DPQ0D2H9 430 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms