RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
PRPF18-201ENST00000320054 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
PRPF18-201ENST00000320054 MPNDQ8N594 471 aa16.65■□□□□ 0.26
PRPF18-201ENST00000320054 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
PRPF18-201ENST00000320054 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
PRPF18-201ENST00000320054 IRS2Q9Y4H2 1338 aa16.65■□□□□ 0.26
PRPF18-201ENST00000320054 SNAP23O00161 211 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 ZBTB22O15209 634 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 GLRX3O76003 335 aaKnown RBP16.64■□□□□ 0.25
PRPF18-201ENST00000320054 ATP5JP18859 108 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 ADORA1P30542 326 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 CCDC158Q5M9N0 1113 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 GORABQ5T7V8 394 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
PRPF18-201ENST00000320054 SLC51AQ86UW1 340 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 NLGN2Q8NFZ4 835 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 TBC1D16Q8TBP0 767 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 PI4K2BQ8TCG2 481 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRPF18-201ENST00000320054 ZNF512BQ96KM6 892 aaPredicted RBP16.64■□□□□ 0.25
PRPF18-201ENST00000320054 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
PRPF18-201ENST00000320054 MYH7P12883 1935 aa16.63■□□□□ 0.25
PRPF18-201ENST00000320054 UFL1O94874 794 aa16.63■□□□□ 0.25
PRPF18-201ENST00000320054 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
PRPF18-201ENST00000320054 TTC22Q5TAA0 569 aa16.63■□□□□ 0.25
PRPF18-201ENST00000320054 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
PRPF18-201ENST00000320054 CHD4Q14839 1912 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 WTIPA6NIX2 430 aaPredicted RBP16.62■□□□□ 0.25
PRPF18-201ENST00000320054 C21orf2O43822 256 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 CAVIN4Q5BKX8 364 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
PRPF18-201ENST00000320054 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
PRPF18-201ENST00000320054 BMP2KLQ5H9B9 411 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
PRPF18-201ENST00000320054 SYT17Q9BSW7 474 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
PRPF18-201ENST00000320054 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
PRPF18-201ENST00000320054 PHKA1P46020 1223 aa16.6■□□□□ 0.25
PRPF18-201ENST00000320054 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
PRPF18-201ENST00000320054 PSMD1Q99460 953 aa16.6■□□□□ 0.25
PRPF18-201ENST00000320054 EYA3Q99504 573 aa16.6■□□□□ 0.25
PRPF18-201ENST00000320054 GNL3LQ9NVN8 582 aaKnown RBP16.6■□□□□ 0.25
PRPF18-201ENST00000320054 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
PRPF18-201ENST00000320054 PSME4Q14997 1843 aa16.6■□□□□ 0.25
PRPF18-201ENST00000320054 SEMA3EO15041 775 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 GSPT1P15170 499 aaKnown RBP16.59■□□□□ 0.25
PRPF18-201ENST00000320054 KLRK1P26718 216 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 HIBADHP31937 336 aaKnown RBP16.59■□□□□ 0.25
PRPF18-201ENST00000320054 GYG1P46976 350 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 BCAMP50895 628 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 HAUS7Q99871 368 aa16.59■□□□□ 0.25
PRPF18-201ENST00000320054 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.25
PRPF18-201ENST00000320054 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.24
PRPF18-201ENST00000320054 VPS37DQ86XT2 251 aa16.58■□□□□ 0.24
PRPF18-201ENST00000320054 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
PRPF18-201ENST00000320054 VPS33BQ9H267 617 aa16.58■□□□□ 0.24
PRPF18-201ENST00000320054 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
PRPF18-201ENST00000320054 SBF1O95248 1867 aa16.57■□□□□ 0.24
PRPF18-201ENST00000320054 ZNF646O15015 1829 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-201ENST00000320054 PDS5AQ29RF7 1337 aaKnown RBP16.57■□□□□ 0.24
PRPF18-201ENST00000320054 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRPF18-201ENST00000320054 WASHC4Q2M389 1173 aa16.57■□□□□ 0.24
PRPF18-201ENST00000320054 GPR101Q96P66 508 aaPredicted RBP16.57■□□□□ 0.24
PRPF18-201ENST00000320054 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
PRPF18-201ENST00000320054 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
PRPF18-201ENST00000320054 MCAMP43121 646 aa16.56■□□□□ 0.24
PRPF18-201ENST00000320054 SCARF1Q14162 830 aa16.56■□□□□ 0.24
PRPF18-201ENST00000320054 TICAM2Q86XR7 235 aa16.56■□□□□ 0.24
PRPF18-201ENST00000320054 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
PRPF18-201ENST00000320054 IL1R1P14778 569 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 SDSP20132 328 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 KIAA2012Q0VF49 1180 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 RASGRF1Q13972 1273 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 CNTROBQ8N137 903 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
PRPF18-201ENST00000320054 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 CD209Q9NNX6 404 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 SCN9AQ15858 1988 aa16.55■□□□□ 0.24
PRPF18-201ENST00000320054 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
PRPF18-201ENST00000320054 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
PRPF18-201ENST00000320054 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
PRPF18-201ENST00000320054 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
PRPF18-201ENST00000320054 WWC3Q9ULE0 1092 aa16.54■□□□□ 0.24
PRPF18-201ENST00000320054 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
PRPF18-201ENST00000320054 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
PRPF18-201ENST00000320054 ZAP70P43403 619 aa16.53■□□□□ 0.24
PRPF18-201ENST00000320054 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms