RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PTGS1P23219 599 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 TCIRG1Q13488 830 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 ACSBG1Q96GR2 724 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 TMEM51Q9NW97 253 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 ZNF771Q7L3S4 317 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 HELBQ8NG08 1087 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-201ENST00000319854 SCARF1Q14162 830 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 CAMK4Q16566 473 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 STARD3NLO95772 234 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 LRMPQ12912 555 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 KCNB2Q92953 911 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 NCOA5Q9HCD5 579 aaKnown RBP18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 CTNNA3Q9UI47 895 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
SHROOM1-201ENST00000319854 IFIT5Q13325 482 aaKnown RBP18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 SNAP23O00161 211 aa18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 APOBRQ0VD83 1088 aa18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 XAGE2Q96GT9 111 aa18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 OGFRQ9NZT2 677 aa18.29■□□□□ 0.52
SHROOM1-201ENST00000319854 GUCY1B3Q02153 619 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 GREM2Q9H772 168 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 MRC1P22897 1456 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 LDHAL6AQ6ZMR3 332 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 C16orf45Q96MC5 204 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 GPHNQ9NQX3 736 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 NRBP1Q9UHY1 535 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 FEZ1Q99689 392 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
SHROOM1-201ENST00000319854 M0R2C6 588 aa18.27■□□□□ 0.52
SHROOM1-201ENST00000319854 HMG20BQ9P0W2 317 aa18.27■□□□□ 0.52
SHROOM1-201ENST00000319854 H3BQV1 296 aa18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 PDIA4P13667 645 aaKnown RBP18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 ZAP70P43403 619 aa18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 ANKRD1Q15327 319 aa18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 CCDC158Q5M9N0 1113 aa18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 IFFO2Q5TF58 517 aa18.27■□□□□ 0.51
SHROOM1-201ENST00000319854 OSBP2Q969R2 916 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 SLFN14P0C7P3 912 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 MAST3O60307 1309 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 GOLGA6L4A6NEF3 574 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 ITGA6P23229 1130 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 TTC6Q86TZ1 520 aa18.26■□□□□ 0.51
SHROOM1-201ENST00000319854 EXOC5O00471 708 aa18.25■□□□□ 0.51
SHROOM1-201ENST00000319854 CCDC186Q7Z3E2 898 aa18.25■□□□□ 0.51
SHROOM1-201ENST00000319854 KRT32Q14532 448 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 KCPQ6ZWJ8 1503 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 KRT85P78386 507 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 SCRN1Q12765 414 aa18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 DDX41Q9UJV9 622 aaKnown RBP18.24■□□□□ 0.51
SHROOM1-201ENST00000319854 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 IRS4O14654 1257 aaPredicted RBP18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 FTOQ9C0B1 505 aaKnown RBP eCLIP18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 VGLL3A8MV65 326 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 IDH1O75874 414 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 LIG1P18858 919 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 KCNQ4P56696 695 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 STK11IPQ8N1F8 1099 aa18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
SHROOM1-201ENST00000319854 E7EWF7 191 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 APPP05067 770 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 ZMYM1Q5SVZ6 1142 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 NLRP10Q86W26 655 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 GTF3C6Q969F1 213 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 DZIP3Q86Y13 1208 aaKnown RBP18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 SPATA32Q96LK8 384 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 PUS7LQ9H0K6 701 aaKnown RBP18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 TNNT1P13805 278 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 PDCP20941 246 aa18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 GIGYF2Q6Y7W6 1299 aaKnown RBP18.22■□□□□ 0.51
SHROOM1-201ENST00000319854 TPM3P06753 285 aa18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 DHX32Q7L7V1 743 aaKnown RBP18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 MRVI1Q9Y6F6 885 aa18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 LMTK3Q96Q04 1460 aa18.21■□□□□ 0.51
SHROOM1-201ENST00000319854 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 SMIM5Q71RC9 77 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms