RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FKBP1BP68106 108 aa18.28■□□□□ 0.52
RPP40-201ENST00000319533 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
RPP40-201ENST00000319533 ANGEL2Q5VTE6 544 aaKnown RBP18.28■□□□□ 0.52
RPP40-201ENST00000319533 GREM2Q9H772 168 aa18.28■□□□□ 0.52
RPP40-201ENST00000319533 MYOZ2Q9NPC6 264 aa18.28■□□□□ 0.52
RPP40-201ENST00000319533 MYH3P11055 1940 aa18.27■□□□□ 0.52
RPP40-201ENST00000319533 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
RPP40-201ENST00000319533 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
RPP40-201ENST00000319533 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
RPP40-201ENST00000319533 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
RPP40-201ENST00000319533 RNF39Q9H2S5 420 aa18.27■□□□□ 0.52
RPP40-201ENST00000319533 DGKZQ13574 1117 aa18.26■□□□□ 0.51
RPP40-201ENST00000319533 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
RPP40-201ENST00000319533 REM2Q8IYK8 340 aaPredicted RBP18.26■□□□□ 0.51
RPP40-201ENST00000319533 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
RPP40-201ENST00000319533 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
RPP40-201ENST00000319533 RNF186Q9NXI6 227 aa18.26■□□□□ 0.51
RPP40-201ENST00000319533 ZNF646O15015 1829 aaPredicted RBP18.26■□□□□ 0.51
RPP40-201ENST00000319533 IL16Q14005 1332 aa18.25■□□□□ 0.51
RPP40-201ENST00000319533 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
RPP40-201ENST00000319533 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
RPP40-201ENST00000319533 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
RPP40-201ENST00000319533 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
RPP40-201ENST00000319533 G2E3Q7L622 706 aa18.25■□□□□ 0.51
RPP40-201ENST00000319533 PAPPA2Q9BXP8 1791 aa18.25■□□□□ 0.51
RPP40-201ENST00000319533 MMP14P50281 582 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 MLLT1Q03111 559 aaPredicted RBP18.24■□□□□ 0.51
RPP40-201ENST00000319533 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 STRIP1Q5VSL9 837 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 RASAL3Q86YV0 1011 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
RPP40-201ENST00000319533 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
RPP40-201ENST00000319533 CSF1RP07333 972 aa18.23■□□□□ 0.51
RPP40-201ENST00000319533 CASP7P55210 303 aa18.23■□□□□ 0.51
RPP40-201ENST00000319533 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
RPP40-201ENST00000319533 AKAP11Q9UKA4 1901 aa18.22■□□□□ 0.51
RPP40-201ENST00000319533 TRPA1O75762 1119 aa18.22■□□□□ 0.51
RPP40-201ENST00000319533 GCKRQ14397 625 aa18.22■□□□□ 0.51
RPP40-201ENST00000319533 TXNRD3Q86VQ6 643 aa18.22■□□□□ 0.51
RPP40-201ENST00000319533 SPEF2Q9C093 1822 aa18.21■□□□□ 0.51
RPP40-201ENST00000319533 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
RPP40-201ENST00000319533 NBPF9Q3BBW0 867 aa18.21■□□□□ 0.51
RPP40-201ENST00000319533 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
RPP40-201ENST00000319533 WNT10BO00744 389 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 ZBTB22O15209 634 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 ITGA6P23229 1130 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 FLIIQ13045 1269 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 OGFOD1Q8N543 542 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
RPP40-201ENST00000319533 CACNA1FO60840 1977 aa18.19■□□□□ 0.5
RPP40-201ENST00000319533 LINS1Q8NG48 757 aa18.19■□□□□ 0.5
RPP40-201ENST00000319533 MOB2Q70IA6 237 aa18.18■□□□□ 0.5
RPP40-201ENST00000319533 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
RPP40-201ENST00000319533 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
RPP40-201ENST00000319533 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
RPP40-201ENST00000319533 IRS2Q9Y4H2 1338 aa18.18■□□□□ 0.5
RPP40-201ENST00000319533 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
RPP40-201ENST00000319533 VAMP4O75379 141 aa18.17■□□□□ 0.5
RPP40-201ENST00000319533 KLRK1P26718 216 aa18.17■□□□□ 0.5
RPP40-201ENST00000319533 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
RPP40-201ENST00000319533 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
RPP40-201ENST00000319533 FANCIQ9NVI1 1328 aa18.17■□□□□ 0.5
RPP40-201ENST00000319533 FKBP5Q13451 457 aaPredicted RBP18.16■□□□□ 0.5
RPP40-201ENST00000319533 PRAMEF18Q5VWM3 479 aa18.16■□□□□ 0.5
RPP40-201ENST00000319533 C15orf52Q6ZUT6 534 aaKnown RBP18.16■□□□□ 0.5
RPP40-201ENST00000319533 MPHOSPH8Q99549 860 aa18.16■□□□□ 0.5
RPP40-201ENST00000319533 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
RPP40-201ENST00000319533 TM4SF4P48230 202 aa18.15■□□□□ 0.5
RPP40-201ENST00000319533 CHRNDQ07001 517 aa18.15■□□□□ 0.5
RPP40-201ENST00000319533 CTU1Q7Z7A3 348 aaKnown RBP18.15■□□□□ 0.5
RPP40-201ENST00000319533 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
RPP40-201ENST00000319533 ANP32CO43423 234 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 SASH1O94885 1247 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 SLC34A2O95436 690 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 NF2P35240 595 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 FOXO4P98177 505 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
RPP40-201ENST00000319533 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
RPP40-201ENST00000319533 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 CD209Q9NNX6 404 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.49
RPP40-201ENST00000319533 ANKRD18BA2A2Z9 1011 aa18.13■□□□□ 0.49
RPP40-201ENST00000319533 GTF2IP78347 998 aa18.13■□□□□ 0.49
RPP40-201ENST00000319533 KIAA0825Q8IV33 1275 aa18.13■□□□□ 0.49
RPP40-201ENST00000319533 MTMR14Q8NCE2 650 aa18.13■□□□□ 0.49
RPP40-201ENST00000319533 COL1A1P02452 1464 aaPredicted RBP18.13■□□□□ 0.49
RPP40-201ENST00000319533 TNRC18O15417 2968 aaPredicted RBP18.12■□□□□ 0.49
RPP40-201ENST00000319533 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
RPP40-201ENST00000319533 LDLRAD1Q5T700 205 aa18.12■□□□□ 0.49
RPP40-201ENST00000319533 CFHR5Q9BXR6 569 aa18.12■□□□□ 0.49
RPP40-201ENST00000319533 IL1R1P14778 569 aa18.11■□□□□ 0.49
RPP40-201ENST00000319533 KCNJ4P48050 445 aa18.11■□□□□ 0.49
RPP40-201ENST00000319533 FKBP1AP62942 108 aaKnown RBP18.11■□□□□ 0.49
RPP40-201ENST00000319533 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
RPP40-201ENST00000319533 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
RPP40-201ENST00000319533 TTLL12Q14166 644 aaPredicted RBP18.11■□□□□ 0.49
RPP40-201ENST00000319533 ARMC9Q7Z3E5 817 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms