RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 H7C1D1 291 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 GNAI3P08754 354 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 VIL1P09327 827 aaKnown RBP22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 MAP1SQ66K74 1059 aaPredicted RBP22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 TMEM57Q8N5G2 664 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 DPF2Q92785 391 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 FBXW7Q969H0 707 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 RIPOR2Q9Y4F9 1068 aa22.7■■□□□ 1.22
KLHDC4-202ENST00000316853 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 RPS12P25398 132 aaKnown RBP22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 HTRA3P83110 453 aa22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
KLHDC4-202ENST00000316853 MROH5Q6ZUA9 1318 aa22.68■■□□□ 1.22
KLHDC4-202ENST00000316853 METTL24Q5JXM2 366 aa22.68■■□□□ 1.22
KLHDC4-202ENST00000316853 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
KLHDC4-202ENST00000316853 POLR2AP24928 1970 aaKnown RBP22.67■■□□□ 1.22
KLHDC4-202ENST00000316853 ZNF646O15015 1829 aaPredicted RBP22.67■■□□□ 1.22
KLHDC4-202ENST00000316853 RFX5P48382 616 aaPredicted RBP22.67■■□□□ 1.22
KLHDC4-202ENST00000316853 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
KLHDC4-202ENST00000316853 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
KLHDC4-202ENST00000316853 IRS2Q9Y4H2 1338 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 PTPN12Q05209 780 aaKnown RBP22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 SAMD7Q7Z3H4 446 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 TRPM4Q8TD43 1214 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 MXD3Q9BW11 206 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 SIL1Q9H173 461 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 CD209Q9NNX6 404 aa22.66■■□□□ 1.22
KLHDC4-202ENST00000316853 HIRAP54198 1017 aaPredicted RBP22.65■■□□□ 1.22
KLHDC4-202ENST00000316853 UBE4AQ14139 1066 aa22.65■■□□□ 1.22
KLHDC4-202ENST00000316853 TBC1D10BQ4KMP7 808 aaPredicted RBP22.65■■□□□ 1.22
KLHDC4-202ENST00000316853 C15orf52Q6ZUT6 534 aaKnown RBP22.65■■□□□ 1.22
KLHDC4-202ENST00000316853 ZNF804AQ7Z570 1209 aa22.65■■□□□ 1.22
KLHDC4-202ENST00000316853 EYA2O00167 538 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 ITGBL1O95965 494 aaPredicted RBP22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 RLBP1P12271 317 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 GTF2IP78347 998 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 TTLL5Q6EMB2 1281 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 AGBL3Q8NEM8 1001 aa22.64■■□□□ 1.21
KLHDC4-202ENST00000316853 EGFRP00533 1210 aa22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 GNAI2P04899 355 aa22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 DACT2Q5SW24 774 aa22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 STRIP1Q5VSL9 837 aa22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 RCAN3Q9UKA8 241 aa22.63■■□□□ 1.21
KLHDC4-202ENST00000316853 PASKQ96RG2 1323 aa22.62■■□□□ 1.21
KLHDC4-202ENST00000316853 PDE8BO95263 885 aa22.62■■□□□ 1.21
KLHDC4-202ENST00000316853 GYG1P46976 350 aa22.62■■□□□ 1.21
KLHDC4-202ENST00000316853 GMLQ99445 158 aa22.62■■□□□ 1.21
KLHDC4-202ENST00000316853 PA2G4Q9UQ80 394 aaKnown RBP22.62■■□□□ 1.21
KLHDC4-202ENST00000316853 SRGAP3O43295 1099 aa22.61■■□□□ 1.21
KLHDC4-202ENST00000316853 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
KLHDC4-202ENST00000316853 VGLL2Q8N8G2 317 aa22.61■■□□□ 1.21
KLHDC4-202ENST00000316853 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
KLHDC4-202ENST00000316853 TRPM7Q96QT4 1865 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 ZNF609O15014 1411 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 IL1R1P14778 569 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 HIBADHP31937 336 aaKnown RBP22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 KIF4BQ2VIQ3 1234 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 ATG9AQ7Z3C6 839 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 JAG2Q9Y219 1238 aa22.6■■□□□ 1.21
KLHDC4-202ENST00000316853 FMR1Q06787 632 aaKnown RBP eCLIP22.59■■□□□ 1.21
KLHDC4-202ENST00000316853 ZC3H15Q8WU90 426 aaKnown RBP22.59■■□□□ 1.21
KLHDC4-202ENST00000316853 FAM84BQ96KN1 310 aaPredicted RBP22.59■■□□□ 1.21
KLHDC4-202ENST00000316853 MYO3BQ8WXR4 1341 aa22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 TRAF5O00463 557 aa22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 CIAO1O76071 339 aa22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 ZNF280AP59817 542 aaPredicted RBP22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 PUM3Q15397 648 aaKnown RBP22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 VPS37DQ86XT2 251 aa22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.21
KLHDC4-202ENST00000316853 MTX1Q13505 466 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 CAVIN4Q5BKX8 364 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 KIAA0825Q8IV33 1275 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 OGFOD1Q8N543 542 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 DNAJC5GQ8N7S2 189 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 GLIS2Q9BZE0 524 aaPredicted RBP22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 MYOZ2Q9NPC6 264 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 COPRSQ9NQ92 184 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 CEP126Q9P2H0 1117 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 FBXO3Q9UK99 471 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 MYH13Q9UKX3 1938 aa22.57■■□□□ 1.2
KLHDC4-202ENST00000316853 ZBTB7BO15156 539 aaPredicted RBP22.56■■□□□ 1.2
KLHDC4-202ENST00000316853 IFIT1P09914 478 aaKnown RBP22.56■■□□□ 1.2
KLHDC4-202ENST00000316853 MS4A1P11836 297 aa22.56■■□□□ 1.2
KLHDC4-202ENST00000316853 CREBZFQ9NS37 354 aa22.56■■□□□ 1.2
KLHDC4-202ENST00000316853 IQSEC3Q9UPP2 1182 aaPredicted RBP22.56■■□□□ 1.2
KLHDC4-202ENST00000316853 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 SASH1O94885 1247 aa22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 FGFR2P21802 821 aa22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 IL15P40933 162 aaPredicted RBP22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 TDRD7Q8NHU6 1098 aaKnown RBP22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 ASTN2O75129 1339 aaPredicted RBP22.55■■□□□ 1.2
KLHDC4-202ENST00000316853 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
KLHDC4-202ENST00000316853 SLC5A1P13866 664 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms