RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TAOK3Q9H2K8 898 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 RNF181Q9P0P0 153 aa9.85□□□□□ -0.83
CDC42-201ENST00000315554 NSFL1CQ9UNZ2 370 aaKnown RBP9.85□□□□□ -0.83
CDC42-201ENST00000315554 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 GOLGB1Q14789 3259 aaKnown RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 SNED1Q8TER0 1413 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 WTIPA6NIX2 430 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 ZBTB7BO15156 539 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 MS4A1P11836 297 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDC42-201ENST00000315554 MVPQ14764 893 aaKnown RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 DPP8Q6V1X1 898 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 RTKN2Q8IZC4 609 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 HELBQ8NG08 1087 aaPredicted RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 MPHOSPH8Q99549 860 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 PUS3Q9BZE2 481 aaKnown RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 PCDHB8Q9UN66 801 aa9.84□□□□□ -0.83
CDC42-201ENST00000315554 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
CDC42-201ENST00000315554 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
CDC42-201ENST00000315554 GNAI2P04899 355 aa9.83□□□□□ -0.84
CDC42-201ENST00000315554 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
CDC42-201ENST00000315554 SIL1Q9H173 461 aa9.83□□□□□ -0.84
CDC42-201ENST00000315554 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
CDC42-201ENST00000315554 ANKIB1Q9P2G1 1089 aa9.83□□□□□ -0.84
CDC42-201ENST00000315554 PA2G4Q9UQ80 394 aaKnown RBP9.83□□□□□ -0.84
CDC42-201ENST00000315554 SNAP23O00161 211 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 TAF5LO75529 589 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 UFL1O94874 794 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 PYGBP11216 843 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 LMNB1P20700 586 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 RFX5P48382 616 aaPredicted RBP9.82□□□□□ -0.84
CDC42-201ENST00000315554 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
CDC42-201ENST00000315554 PDE3AQ14432 1141 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 AOC3Q16853 763 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 LRRC24Q50LG9 513 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 LDHAL6AQ6ZMR3 332 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 TMC4Q7Z404 712 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 MINPP1Q9UNW1 487 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 FER1L6Q2WGJ9 1857 aa9.82□□□□□ -0.84
CDC42-201ENST00000315554 LRRC37AA6NMS7 1700 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 PNMA6EA0A0J9YXQ4 647 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 SRGAP3O43295 1099 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 PPIP5K2O43314 1243 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 YY1P25490 414 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
CDC42-201ENST00000315554 IRX6P78412 446 aaPredicted RBP9.81□□□□□ -0.84
CDC42-201ENST00000315554 CHRNDQ07001 517 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 TBC1D16Q8TBP0 767 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 ZNF526Q8TF50 670 aaPredicted RBP9.81□□□□□ -0.84
CDC42-201ENST00000315554 CRBNQ96SW2 442 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 PSMD1Q99460 953 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 DDX19BQ9UMR2 479 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 DUOX1Q9NRD9 1551 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 LTBP3Q9NS15 1303 aa9.81□□□□□ -0.84
CDC42-201ENST00000315554 COL4A5P29400 1685 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 KLRK1P26718 216 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 PTPN12Q05209 780 aaKnown RBP9.8□□□□□ -0.84
CDC42-201ENST00000315554 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 GGA1Q9UJY5 639 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 HDAC5Q9UQL6 1122 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 XDHP47989 1333 aa9.8□□□□□ -0.84
CDC42-201ENST00000315554 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 RTFDC1Q9BY42 306 aaPredicted RBP9.79□□□□□ -0.84
CDC42-201ENST00000315554 ZBTB40Q9NUA8 1239 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 UTRNP46939 3433 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 EYA2O00167 538 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 ATP2B4P23634 1241 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 KCNJ4P48050 445 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 ATP8B2P98198 1209 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 WASHC4Q2M389 1173 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 METTL24Q5JXM2 366 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 CEP85Q6P2H3 762 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 SUPT20HQ8NEM7 779 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 ANKRD2Q9GZV1 360 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 DBNDD1Q9H9R9 158 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 RIPOR2Q9Y4F9 1068 aa9.79□□□□□ -0.84
CDC42-201ENST00000315554 ZNF541Q9H0D2 1346 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 LTBP1Q14766 1721 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 SBF1O95248 1867 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 CCDC88AQ3V6T2 1871 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 MTX1Q13505 466 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 ATG9AQ7Z3C6 839 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
CDC42-201ENST00000315554 TXNRD3Q86VQ6 643 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 JDP2Q8WYK2 163 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 EYA3Q99504 573 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
CDC42-201ENST00000315554 ZNF804BA4D1E1 1349 aa9.77□□□□□ -0.84
CDC42-201ENST00000315554 CHD4Q14839 1912 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms