RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
SPAST-201ENST00000315285 USP8P40818 1118 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
SPAST-201ENST00000315285 RRAGDQ9NQL2 400 aaPredicted RBP15.76■□□□□ 0.11
SPAST-201ENST00000315285 HELLSQ9NRZ9 838 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 KIF24Q5T7B8 1368 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 ATL3Q6DD88 541 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 TRMT2AQ8IZ69 625 aaKnown RBP15.76■□□□□ 0.11
SPAST-201ENST00000315285 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 KDM5CP41229 1560 aa15.76■□□□□ 0.11
SPAST-201ENST00000315285 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 IL2RBP14784 551 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 STAT6P42226 847 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
SPAST-201ENST00000315285 KRT222Q8N1A0 295 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 ZNF790Q6PG37 636 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 EHBP1Q8NDI1 1231 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 GTF2F1P35269 517 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPAST-201ENST00000315285 MATR3P43243 847 aaKnown RBP eCLIP15.75■□□□□ 0.119e-6■■□□□ 13
SPAST-201ENST00000315285 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
SPAST-201ENST00000315285 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 TNNI3KQ59H18 835 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
SPAST-201ENST00000315285 DHX58Q96C10 678 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 JADE2Q9NQC1 790 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 FPGT-TNNI3KV9GXZ4 949 aa15.75■□□□□ 0.11
SPAST-201ENST00000315285 SLU7O95391 586 aaKnown RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 TUBB4AP04350 444 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 GNAT2P19087 354 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 TCERG1LQ5VWI1 586 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 KLHDC4Q8TBB5 520 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 FAM227BQ96M60 508 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 METTL22Q9BUU2 404 aaPredicted RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 LGR6Q9HBX8 967 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 AKR1B10O60218 316 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 TIMM10P62072 90 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 NAA15Q9BXJ9 866 aaKnown RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 C19orf44Q9H6X5 657 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 LMBRD1Q9NUN5 540 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 IFNKQ9P0W0 207 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 GSPT1P15170 499 aaKnown RBP15.74■□□□□ 0.11
SPAST-201ENST00000315285 FAM160A1Q05DH4 1040 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 FBXO3Q9UK99 471 aa15.74■□□□□ 0.11
SPAST-201ENST00000315285 GNAQP50148 359 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 GSTO1P78417 241 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 DZIP3Q86Y13 1208 aaKnown RBP15.73■□□□□ 0.11
SPAST-201ENST00000315285 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPAST-201ENST00000315285 RXRAP19793 462 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 ATP6V1AP38606 617 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 CETN2P41208 172 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 EYA2O00167 538 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 HSPA4P34932 840 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 MAGEB6Q8N7X4 407 aa15.73■□□□□ 0.11
SPAST-201ENST00000315285 UTP14AQ9BVJ6 771 aaKnown RBP15.73■□□□□ 0.11
SPAST-201ENST00000315285 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 A0A1B0GVL5 298 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 A0A1B0GUL7 405 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 PSMA7O14818 248 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPAST-201ENST00000315285 V9GYY5 206 aaPredicted RBP15.72■□□□□ 0.11
SPAST-201ENST00000315285 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPAST-201ENST00000315285 PLBD2Q8NHP8 589 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
SPAST-201ENST00000315285 ARFGAP3Q9NP61 516 aa15.72■□□□□ 0.11
SPAST-201ENST00000315285 CYLC1P35663 651 aaPredicted RBP15.72■□□□□ 0.11
SPAST-201ENST00000315285 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 RTL9Q8NET4 1388 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CCDC175P0C221 793 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CALM1P0DP23 149 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CALM2P0DP24 149 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CALM3P0DP25 149 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 HEATR3Q7Z4Q2 680 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 MIGA1Q8NAN2 632 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 ANKRD62A6NC57 917 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 TMCO5BA8MYB1 307 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 LIG1P18858 919 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 ZHX1Q9UKY1 873 aaPredicted RBP15.71■□□□□ 0.11
SPAST-201ENST00000315285 HLA-DOAP06340 250 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 SUCLG2Q96I99 432 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
SPAST-201ENST00000315285 CTAGE15A4D2H0 777 aa15.71■□□□□ 0.1
SPAST-201ENST00000315285 CTAGE8P0CG41 777 aa15.71■□□□□ 0.1
SPAST-201ENST00000315285 SF3B2Q13435 895 aaKnown RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms