RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 TXNRD3Q86VQ6 643 aa27.56■■■□□ 2
CCDC85B-201ENST00000312579 LPIN2Q92539 896 aa27.56■■■□□ 2
CCDC85B-201ENST00000312579 DBNLQ9UJU6 430 aaKnown RBP27.56■■■□□ 2
CCDC85B-201ENST00000312579 LEMD3Q9Y2U8 911 aa27.56■■■□□ 2
CCDC85B-201ENST00000312579 XAGE2Q96GT9 111 aa27.55■■■□□ 2
CCDC85B-201ENST00000312579 IFIT2P09913 472 aaKnown RBP27.54■■■□□ 2
CCDC85B-201ENST00000312579 SLC5A1P13866 664 aa27.54■■■□□ 2
CCDC85B-201ENST00000312579 ARFGEF1Q9Y6D6 1849 aa27.53■■■□□ 2
CCDC85B-201ENST00000312579 RTKN2Q8IZC4 609 aa27.53■■■□□ 2
CCDC85B-201ENST00000312579 RIMBP2O15034 1052 aa27.52■■■□□ 2
CCDC85B-201ENST00000312579 IFIT1P09914 478 aaKnown RBP27.52■■■□□ 2
CCDC85B-201ENST00000312579 GYG1P46976 350 aa27.52■■■□□ 2
CCDC85B-201ENST00000312579 SOGA3Q5TF21 947 aa27.52■■■□□ 2
CCDC85B-201ENST00000312579 TSHZ3Q63HK5 1081 aa27.52■■■□□ 2
CCDC85B-201ENST00000312579 IRS2Q9Y4H2 1338 aa27.52■■■□□ 2
CCDC85B-201ENST00000312579 RTFDC1Q9BY42 306 aaPredicted RBP27.51■■■□□ 2
CCDC85B-201ENST00000312579 NFKBIEO00221 500 aa27.51■■□□□ 1.99
CCDC85B-201ENST00000312579 BCAMP50895 628 aa27.5■■□□□ 1.99
CCDC85B-201ENST00000312579 RASSF7Q02833 373 aa27.5■■□□□ 1.99
CCDC85B-201ENST00000312579 ZNF277Q9NRM2 450 aaPredicted RBP27.5■■□□□ 1.99
CCDC85B-201ENST00000312579 SALL3Q9BXA9 1300 aa27.49■■□□□ 1.99
CCDC85B-201ENST00000312579 PHKA1P46020 1223 aa27.49■■□□□ 1.99
CCDC85B-201ENST00000312579 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCDC85B-201ENST00000312579 FAM84BQ96KN1 310 aaPredicted RBP27.49■■□□□ 1.99
CCDC85B-201ENST00000312579 FER1L6Q2WGJ9 1857 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 GORABQ5T7V8 394 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 ARHGAP27Q6ZUM4 889 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 PSMD1Q99460 953 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 ARAP2Q8WZ64 1704 aa27.48■■□□□ 1.99
CCDC85B-201ENST00000312579 RGS3P49796 1198 aa27.47■■□□□ 1.99
CCDC85B-201ENST00000312579 GPR162Q16538 588 aa27.47■■□□□ 1.99
CCDC85B-201ENST00000312579 AOC3Q16853 763 aa27.47■■□□□ 1.99
CCDC85B-201ENST00000312579 GRIPAP1Q4V328 841 aa27.47■■□□□ 1.99
CCDC85B-201ENST00000312579 PLEKHM2Q8IWE5 1019 aa27.47■■□□□ 1.99
CCDC85B-201ENST00000312579 MX1P20591 662 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 CCDC102BQ68D86 513 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 ZC3H12CQ9C0D7 883 aaKnown RBP27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 TAOK3Q9H2K8 898 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 MED23Q9ULK4 1368 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 PRELPP51888 382 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 DOK7Q18PE1 504 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 C15orf52Q6ZUT6 534 aaKnown RBP27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 SUPT20HQ8NEM7 779 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 EYA3Q99504 573 aa27.46■■□□□ 1.99
CCDC85B-201ENST00000312579 FBXO33Q7Z6M2 555 aa27.45■■□□□ 1.98
CCDC85B-201ENST00000312579 PPIP5K2O43314 1243 aa27.44■■□□□ 1.98
CCDC85B-201ENST00000312579 HIBADHP31937 336 aaKnown RBP27.44■■□□□ 1.98
CCDC85B-201ENST00000312579 PDE1AP54750 535 aa27.44■■□□□ 1.98
CCDC85B-201ENST00000312579 CAVIN4Q5BKX8 364 aa27.44■■□□□ 1.98
CCDC85B-201ENST00000312579 TTC39AQ5SRH9 613 aa27.43■■□□□ 1.98
CCDC85B-201ENST00000312579 VPS37DQ86XT2 251 aa27.43■■□□□ 1.98
CCDC85B-201ENST00000312579 ECHDC1Q9NTX5 307 aa27.43■■□□□ 1.98
CCDC85B-201ENST00000312579 KIAA2012Q0VF49 1180 aa27.42■■□□□ 1.98
CCDC85B-201ENST00000312579 SCARF1Q14162 830 aa27.42■■□□□ 1.98
CCDC85B-201ENST00000312579 CCDC158Q5M9N0 1113 aa27.42■■□□□ 1.98
CCDC85B-201ENST00000312579 DBNDD1Q9H9R9 158 aa27.42■■□□□ 1.98
CCDC85B-201ENST00000312579 COL4A5P29400 1685 aa27.42■■□□□ 1.98
CCDC85B-201ENST00000312579 STAP2Q9UGK3 403 aa27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 NDUFB9Q9Y6M9 179 aa27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 IARSP41252 1262 aaKnown RBP27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 PI16Q6UXB8 463 aa27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 ZNF804AQ7Z570 1209 aa27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 PI4K2BQ8TCG2 481 aa27.41■■□□□ 1.98
CCDC85B-201ENST00000312579 LTBP3Q9NS15 1303 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 LARGE2Q8N3Y3 721 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 GPATCH3Q96I76 525 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 BOLA2Q9H3K6 86 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 CD209Q9NNX6 404 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 JAG2Q9Y219 1238 aa27.4■■□□□ 1.98
CCDC85B-201ENST00000312579 UTRNP46939 3433 aa27.39■■□□□ 1.98
CCDC85B-201ENST00000312579 SNRKQ9NRH2 765 aa27.39■■□□□ 1.98
CCDC85B-201ENST00000312579 G3V3G9 751 aa27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 ARID4AP29374 1257 aaPredicted RBP27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 MCAMP43121 646 aa27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 RASGRF1Q13972 1273 aa27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 DCAF8Q5TAQ9 597 aa27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 TTC41PQ6P2S7 1318 aa27.38■■□□□ 1.97
CCDC85B-201ENST00000312579 MAP4K4O95819 1239 aaPredicted RBP27.37■■□□□ 1.97
CCDC85B-201ENST00000312579 ATP5JP18859 108 aa27.37■■□□□ 1.97
CCDC85B-201ENST00000312579 COA1Q9GZY4 146 aa27.37■■□□□ 1.97
CCDC85B-201ENST00000312579 KCNQ5Q9NR82 932 aa27.37■■□□□ 1.97
CCDC85B-201ENST00000312579 COL1A1P02452 1464 aaPredicted RBP27.37■■□□□ 1.97
CCDC85B-201ENST00000312579 ECE2O60344 883 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 TDRD7Q8NHU6 1098 aaKnown RBP27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 OSBPL3Q9H4L5 887 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 GNL3LQ9NVN8 582 aaKnown RBP27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 FRAT2O75474 233 aaPredicted RBP27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 UQCRFS1P1P0C7P4 283 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 IL1R1P14778 569 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 HMG20BQ9P0W2 317 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 CHD4Q14839 1912 aa27.36■■□□□ 1.97
CCDC85B-201ENST00000312579 CHAF1AQ13111 956 aaPredicted RBP27.35■■□□□ 1.97
CCDC85B-201ENST00000312579 EDC3Q96F86 508 aaKnown RBP27.35■■□□□ 1.97
CCDC85B-201ENST00000312579 CCDC88AQ3V6T2 1871 aa27.34■■□□□ 1.97
CCDC85B-201ENST00000312579 YDJCA8MPS7 323 aa27.34■■□□□ 1.97
CCDC85B-201ENST00000312579 ZNF512BQ96KM6 892 aaPredicted RBP27.34■■□□□ 1.97
CCDC85B-201ENST00000312579 DNAJC2Q99543 621 aaKnown RBP27.34■■□□□ 1.97
CCDC85B-201ENST00000312579 VPS33BQ9H267 617 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms