RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 TADA3O75528 432 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 ANXA1P04083 346 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 CCDC73Q6ZRK6 1079 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 REXO1L1PQ8IX06 675 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 GOLGA5Q8TBA6 731 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 GOLPH3LQ9H4A5 285 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 TOMM22Q9NS69 142 aa20.98■□□□□ 0.95
SPSB4-201ENST00000310546 CC2D1AQ6P1N0 951 aaPredicted RBP20.97■□□□□ 0.95
SPSB4-201ENST00000310546 ZNF530Q6P9A1 599 aaPredicted RBP20.97■□□□□ 0.95
SPSB4-201ENST00000310546 FBXO18Q8NFZ0 1043 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 IMPACTQ9P2X3 320 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 GLRX3O76003 335 aaKnown RBP20.97■□□□□ 0.95
SPSB4-201ENST00000310546 PSMA5P28066 241 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 TEX2Q8IWB9 1127 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 CCDC150Q8NCX0 1101 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 UBXN6Q9BZV1 441 aa20.97■□□□□ 0.95
SPSB4-201ENST00000310546 ICE2Q659A1 982 aa20.96■□□□□ 0.95
SPSB4-201ENST00000310546 NAT10Q9H0A0 1025 aaKnown RBP20.96■□□□□ 0.95
SPSB4-201ENST00000310546 ADCY9O60503 1353 aa20.96■□□□□ 0.95
SPSB4-201ENST00000310546 EFCAB8A8MWE9 144 aa20.96■□□□□ 0.95
SPSB4-201ENST00000310546 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
SPSB4-201ENST00000310546 TAF6LQ9Y6J9 622 aa20.96■□□□□ 0.95
SPSB4-201ENST00000310546 LOC102724159A0A0B4J2E5 919 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 PWP2Q15269 919 aaKnown RBP20.95■□□□□ 0.94
SPSB4-201ENST00000310546 CCDC158Q5M9N0 1113 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 GOLGA6L1Q8N7Z2 621 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 FAM227BQ96M60 508 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 ARFGAP3Q9NP61 516 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
SPSB4-201ENST00000310546 RESTQ13127 1097 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 YY1AP1Q9H869 796 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 SLC27A2O14975 620 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 FANCGO15287 622 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 ATP8B1O43520 1251 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 ANKRD1Q15327 319 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 ZRSR1Q15695 479 aaKnown RBP20.94■□□□□ 0.94
SPSB4-201ENST00000310546 CCDC30Q5VVM6 783 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 LRRFIP1Q32MZ4 808 aaKnown RBP20.94■□□□□ 0.94
SPSB4-201ENST00000310546 CTR9Q6PD62 1173 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 SDF4Q9BRK5 362 aa20.94■□□□□ 0.94
SPSB4-201ENST00000310546 GEMIN8Q9NWZ8 242 aaKnown RBP20.94■□□□□ 0.94
SPSB4-201ENST00000310546 TPM1P09493 284 aa20.93■□□□□ 0.94
SPSB4-201ENST00000310546 TOB2Q14106 344 aaPredicted RBP20.93■□□□□ 0.94
SPSB4-201ENST00000310546 PHLPP2Q6ZVD8 1323 aa20.93■□□□□ 0.94
SPSB4-201ENST00000310546 KCNB2Q92953 911 aa20.93■□□□□ 0.94
SPSB4-201ENST00000310546 SECISBP2LQ93073 1101 aaKnown RBP20.93■□□□□ 0.94
SPSB4-201ENST00000310546 SRRTQ9BXP5 876 aaKnown RBP20.93■□□□□ 0.94
SPSB4-201ENST00000310546 STRN4Q9NRL3 753 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 ACTN2P35609 894 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 ME1P48163 572 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 LEKR1Q6ZMV7 388 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 EXOC4Q96A65 974 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
SPSB4-201ENST00000310546 TUBB4AP04350 444 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 TRIM65Q6PJ69 517 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 PARP3Q9Y6F1 533 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 TRPM3Q9HCF6 1732 aaPredicted RBP20.91■□□□□ 0.94
SPSB4-201ENST00000310546 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
SPSB4-201ENST00000310546 RPS6KB1P23443 525 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 DPCR1Q3MIW9 517 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 FSIP1Q8NA03 581 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 UTP14AQ9BVJ6 771 aaKnown RBP20.91■□□□□ 0.94
SPSB4-201ENST00000310546 MAP4K1Q92918 833 aa20.91■□□□□ 0.94
SPSB4-201ENST00000310546 H3BQF6 201 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 BIN1O00499 593 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 NBPF7P0C2Y1 421 aaPredicted RBP20.9■□□□□ 0.94
SPSB4-201ENST00000310546 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
SPSB4-201ENST00000310546 PARD6BQ9BYG5 372 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 JRKLQ9Y4A0 524 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 PRAMEF22A3QJZ6 481 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 FAM160A1Q05DH4 1040 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 POLA2Q14181 598 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 NOM1Q5C9Z4 860 aaKnown RBP20.9■□□□□ 0.94
SPSB4-201ENST00000310546 CLASRPQ8N2M8 674 aaKnown RBP20.9■□□□□ 0.94
SPSB4-201ENST00000310546 DRC1Q96MC2 740 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 FUT8Q9BYC5 575 aa20.9■□□□□ 0.94
SPSB4-201ENST00000310546 ZSCAN16Q9H4T2 348 aaPredicted RBP20.9■□□□□ 0.94
SPSB4-201ENST00000310546 PPFIA3O75145 1194 aa20.89■□□□□ 0.94
SPSB4-201ENST00000310546 VPS18Q9P253 973 aa20.89■□□□□ 0.94
SPSB4-201ENST00000310546 KIF1AQ12756 1690 aa20.89■□□□□ 0.93
SPSB4-201ENST00000310546 LRRC37A3O60309 1634 aa20.89■□□□□ 0.93
SPSB4-201ENST00000310546 A0A1B0GUL7 405 aa20.89■□□□□ 0.93
SPSB4-201ENST00000310546 NMIQ13287 307 aaPredicted RBP20.89■□□□□ 0.93
SPSB4-201ENST00000310546 GPR161Q8N6U8 529 aaKnown RBP20.89■□□□□ 0.93
SPSB4-201ENST00000310546 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.93
SPSB4-201ENST00000310546 TTC41PQ6P2S7 1318 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 ANKRD65E5RJM6 399 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 TTC31Q49AM3 519 aaPredicted RBP20.88■□□□□ 0.93
SPSB4-201ENST00000310546 PRDM11Q9NQV5 511 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 CCP110O43303 1012 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 LMOD1P29536 600 aaPredicted RBP20.88■□□□□ 0.93
SPSB4-201ENST00000310546 GOLGA8FQ08AF8 430 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 GOLGA8DPQ0D2H9 430 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 TEFQ10587 303 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 TAF7Q15545 349 aaPredicted RBP20.88■□□□□ 0.93
SPSB4-201ENST00000310546 PACS2Q86VP3 889 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 USP28Q96RU2 1077 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 MCM6Q14566 821 aa20.88■□□□□ 0.93
SPSB4-201ENST00000310546 PTPN21Q16825 1174 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms