RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ALDH8A1Q9H2A2 487 aaPredicted RBP28.71■■■□□ 2.19
RFWD2-201ENST00000308769 HELBQ8NG08 1087 aaPredicted RBP28.7■■■□□ 2.19
RFWD2-201ENST00000308769 SEC31BQ9NQW1 1179 aa28.7■■■□□ 2.19
RFWD2-201ENST00000308769 USP21Q9UK80 565 aa28.7■■■□□ 2.19
RFWD2-201ENST00000308769 STOX1Q6ZVD7 989 aa28.7■■■□□ 2.18
RFWD2-201ENST00000308769 THSD7AQ9UPZ6 1657 aa28.7■■■□□ 2.18
RFWD2-201ENST00000308769 CASZ1Q86V15 1759 aa28.7■■■□□ 2.18
RFWD2-201ENST00000308769 STX6O43752 255 aa28.69■■■□□ 2.18
RFWD2-201ENST00000308769 A0A0G2JLW4 131 aa28.69■■■□□ 2.18
RFWD2-201ENST00000308769 NCLP19338 710 aaKnown RBP28.69■■■□□ 2.18
RFWD2-201ENST00000308769 GPT2Q8TD30 523 aa28.69■■■□□ 2.18
RFWD2-201ENST00000308769 MROH5Q6ZUA9 1318 aa28.68■■■□□ 2.18
RFWD2-201ENST00000308769 WASHC4Q2M389 1173 aa28.67■■■□□ 2.18
RFWD2-201ENST00000308769 LRRFIP1Q32MZ4 808 aaKnown RBP28.67■■■□□ 2.18
RFWD2-201ENST00000308769 ZSCAN22P10073 491 aaPredicted RBP28.67■■■□□ 2.18
RFWD2-201ENST00000308769 XRCC6P12956 609 aaKnown RBP eCLIP28.67■■■□□ 2.18
RFWD2-201ENST00000308769 PUM3Q15397 648 aaKnown RBP28.67■■■□□ 2.18
RFWD2-201ENST00000308769 GAS2L3Q86XJ1 694 aa28.67■■■□□ 2.18
RFWD2-201ENST00000308769 ZNF652Q9Y2D9 606 aa28.67■■■□□ 2.18
RFWD2-201ENST00000308769 ZFYP08048 801 aaPredicted RBP28.66■■■□□ 2.18
RFWD2-201ENST00000308769 PHKA1P46020 1223 aa28.66■■■□□ 2.18
RFWD2-201ENST00000308769 FAM182BQ5T319 152 aa28.66■■■□□ 2.18
RFWD2-201ENST00000308769 CAVIN1Q6NZI2 390 aaKnown RBP28.66■■■□□ 2.18
RFWD2-201ENST00000308769 CCDC102BQ68D86 513 aa28.66■■■□□ 2.18
RFWD2-201ENST00000308769 SMIM5Q71RC9 77 aa28.66■■■□□ 2.18
RFWD2-201ENST00000308769 ZNF512BQ96KM6 892 aaPredicted RBP28.66■■■□□ 2.18
RFWD2-201ENST00000308769 MPHOSPH8Q99549 860 aa28.66■■■□□ 2.18
RFWD2-201ENST00000308769 FGFR2P21802 821 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 CCDC152Q4G0S7 254 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 COL4A1P02462 1669 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 SCN7AQ01118 1682 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 NHSQ6T4R5 1651 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 SPATA31A6Q5VVP1 1343 aa28.65■■■□□ 2.18
RFWD2-201ENST00000308769 Q6ZUG5 572 aa28.64■■■□□ 2.18
RFWD2-201ENST00000308769 LPIN2Q92539 896 aa28.64■■■□□ 2.18
RFWD2-201ENST00000308769 SNAP23O00161 211 aa28.64■■■□□ 2.18
RFWD2-201ENST00000308769 STK3Q13188 491 aa28.64■■■□□ 2.18
RFWD2-201ENST00000308769 APPBP2Q92624 585 aa28.64■■■□□ 2.18
RFWD2-201ENST00000308769 PUS7LQ9H0K6 701 aaKnown RBP28.64■■■□□ 2.18
RFWD2-201ENST00000308769 FOXP2O15409 715 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 LRRC2Q9BYS8 371 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 GDPD2Q9HCC8 539 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 NSFL1CQ9UNZ2 370 aaKnown RBP28.63■■■□□ 2.17
RFWD2-201ENST00000308769 TAF1P21675 1872 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 ARID4AP29374 1257 aaPredicted RBP28.63■■■□□ 2.17
RFWD2-201ENST00000308769 TTLL5Q6EMB2 1281 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 CLEC4GQ6UXB4 293 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 CNTNAP4Q9C0A0 1308 aa28.63■■■□□ 2.17
RFWD2-201ENST00000308769 F13A1P00488 732 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 PANK2Q9BZ23 570 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 GRPEL1Q9HAV7 217 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 ISY1Q9ULR0 285 aaKnown RBP28.61■■■□□ 2.17
RFWD2-201ENST00000308769 RTL9Q8NET4 1388 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 MRE11P49959 708 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 PIH1D3Q9NQM4 214 aaKnown RBP28.61■■■□□ 2.17
RFWD2-201ENST00000308769 MTMR6Q9Y217 621 aa28.61■■■□□ 2.17
RFWD2-201ENST00000308769 E7EWF7 191 aa28.6■■■□□ 2.17
RFWD2-201ENST00000308769 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.6■■■□□ 2.179e-7■■■■□ 19.7
RFWD2-201ENST00000308769 RBM27Q9P2N5 1060 aaKnown RBP28.6■■■□□ 2.17
RFWD2-201ENST00000308769 HSP90B1P14625 803 aaKnown RBP28.6■■■□□ 2.17
RFWD2-201ENST00000308769 HMGB1P09429 215 aaKnown RBP28.59■■■□□ 2.17
RFWD2-201ENST00000308769 SLC5A1P13866 664 aa28.59■■■□□ 2.17
RFWD2-201ENST00000308769 IGHMBP2P38935 993 aaKnown RBP28.59■■■□□ 2.17
RFWD2-201ENST00000308769 BRF1Q92994 677 aa28.59■■■□□ 2.17
RFWD2-201ENST00000308769 ADD2P35612 726 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 TTF1Q15361 905 aaPredicted RBP28.58■■■□□ 2.17
RFWD2-201ENST00000308769 ZSCAN23Q3MJ62 389 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 ERFEQ4G0M1 354 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 DHX32Q7L7V1 743 aaKnown RBP28.58■■■□□ 2.17
RFWD2-201ENST00000308769 DOCK2Q92608 1830 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 GPAA1O43292 621 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 UQCRFS1P1P0C7P4 283 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 SLC9C2Q5TAH2 1124 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 BICDL1Q6ZP65 573 aa28.58■■■□□ 2.17
RFWD2-201ENST00000308769 SBF2Q86WG5 1849 aa28.58■■■□□ 2.16
RFWD2-201ENST00000308769 A0A1B0GUL6 1792 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 VPS37CA5D8V6 355 aaPredicted RBP28.57■■■□□ 2.16
RFWD2-201ENST00000308769 IDH1O75874 414 aaKnown RBP28.57■■■□□ 2.16
RFWD2-201ENST00000308769 GTF3C6Q969F1 213 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 CNPY2Q9Y2B0 182 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 TAF1LQ8IZX4 1826 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 FGD1P98174 961 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 C3orf67Q6ZVT6 689 aa28.57■■■□□ 2.16
RFWD2-201ENST00000308769 USP48Q86UV5 1035 aa28.56■■■□□ 2.16
RFWD2-201ENST00000308769 ATRNO75882 1429 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 HAND2P61296 217 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 EXOSC10Q01780 885 aaKnown RBP28.55■■■□□ 2.16
RFWD2-201ENST00000308769 LARP1BQ659C4 914 aaKnown RBP28.55■■■□□ 2.16
RFWD2-201ENST00000308769 TBC1D9BQ66K14 1250 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 ZSCAN25Q6NSZ9 544 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 BCL2L12Q9HB09 334 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 TMEM63CQ9P1W3 806 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 MBD3O95983 291 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 FGAP02671 866 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 RASGRF1Q13972 1273 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 LY75O60449 1722 aa28.55■■■□□ 2.16
RFWD2-201ENST00000308769 GADD45BO75293 160 aaPredicted RBP28.54■■■□□ 2.16
RFWD2-201ENST00000308769 CHRNDQ07001 517 aa28.54■■■□□ 2.16
RFWD2-201ENST00000308769 MEX3CQ5U5Q3 659 aaKnown RBP28.54■■■□□ 2.16
RFWD2-201ENST00000308769 CTNNA3Q9UI47 895 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms