RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 LRMPQ12912 555 aa20.85■□□□□ 0.93
ATP2A2-201ENST00000308664 DDX21Q9NR30 783 aaKnown RBP eCLIP20.85■□□□□ 0.93
ATP2A2-201ENST00000308664 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
ATP2A2-201ENST00000308664 IRS4O14654 1257 aaPredicted RBP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 N4BP3O15049 544 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 ZNF75DP51815 510 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 ENOX2Q16206 610 aaKnown RBP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 PNMA6EA0A0J9YXQ4 647 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 SPTLC2O15270 562 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 CYP7A1P22680 504 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 PLCD3Q8N3E9 789 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 SRRTQ9BXP5 876 aaKnown RBP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 BICC1Q9H694 974 aaKnown RBP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 ZNF287Q9HBT7 754 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 APOBRQ0VD83 1088 aa20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 SEC63Q9UGP8 760 aaKnown RBP20.84■□□□□ 0.93
ATP2A2-201ENST00000308664 SSRP1Q08945 709 aaKnown RBP20.83■□□□□ 0.93
ATP2A2-201ENST00000308664 GIMAP7Q8NHV1 300 aa20.83■□□□□ 0.93
ATP2A2-201ENST00000308664 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
ATP2A2-201ENST00000308664 PAFAH1B1P43034 410 aa20.83■□□□□ 0.93
ATP2A2-201ENST00000308664 TFCP2L1Q9NZI6 479 aa20.83■□□□□ 0.93
ATP2A2-201ENST00000308664 SGSM2O43147 1006 aa20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 MCM3P25205 808 aa20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 MNAT1P51948 309 aa20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 TAF4BQ92750 862 aa20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 PUF60Q9UHX1 559 aaKnown RBP20.83■□□□□ 0.92
ATP2A2-201ENST00000308664 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 TFCP2Q12800 502 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 MFSD6Q6ZSS7 791 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 LZTFL1Q9NQ48 299 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 KDM6BO15054 1643 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 PTPDC1A2A3K4 754 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 ZNF496Q96IT1 587 aaPredicted RBP20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 FAM107BQ9H098 131 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 RNF41Q9H4P4 317 aaPredicted RBP20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 MAGI2Q86UL8 1455 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 TTC41PQ6P2S7 1318 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 MCMDC2Q4G0Z9 681 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 ALG1Q9BT22 464 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 JADE2Q9NQC1 790 aa20.82■□□□□ 0.92
ATP2A2-201ENST00000308664 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 CTAGE15A4D2H0 777 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 CTAGE8P0CG41 777 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 EVCP57679 992 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 CTAGE6Q86UF2 777 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 CTAGE4Q8IX94 777 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 MIGA1Q8NAN2 632 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 NCOA7Q8NI08 942 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 AFMP43652 599 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 TTF1Q15361 905 aaPredicted RBP20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 VPS18Q9P253 973 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 TMEM2Q9UHN6 1383 aa20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 BMP2KQ9NSY1 1161 aaPredicted RBP20.81■□□□□ 0.92
ATP2A2-201ENST00000308664 KCNQ3O43525 872 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 NLRP5P59047 1200 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 NBPF7P0C2Y1 421 aaPredicted RBP20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 VGLL3A8MV65 326 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 CHL1O00533 1208 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 GABPB1Q06547 395 aaPredicted RBP20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 GOLGA1Q92805 767 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 GNPATO15228 680 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 CATIPQ7Z7H3 387 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 RTCBQ9Y3I0 505 aaKnown RBP20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 NDUFB9Q9Y6M9 179 aa20.8■□□□□ 0.92
ATP2A2-201ENST00000308664 CDC37L1Q7L3B6 337 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 LEO1Q8WVC0 666 aaPredicted RBP20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 ZNF594Q96JF6 807 aaPredicted RBP20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 DNAJC10Q8IXB1 793 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 RAD50Q92878 1312 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 TRPM2O94759 1503 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 GOLGA6L7A0A1B0GV03 622 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 RHOXF2BP0C7M4 288 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 GTF2A1P52655 376 aaPredicted RBP20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 CACNA2D4Q7Z3S7 1137 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 RHOXF2Q9BQY4 288 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 CLSTN2Q9H4D0 955 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 PTPRTO14522 1441 aa20.79■□□□□ 0.92
ATP2A2-201ENST00000308664 BCCIPQ9P287 314 aaKnown RBP eCLIP20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 CALRP27797 417 aaKnown RBP20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 TDRD12Q587J7 1177 aaKnown RBP20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 TPTE2Q6XPS3 522 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 USO1O60763 962 aaKnown RBP20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 BAG3O95817 575 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 LDHCP07864 332 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 FKBP15Q5T1M5 1219 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 CARD6Q9BX69 1037 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 SLC4A4Q9Y6R1 1079 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 TUBB4AP04350 444 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 CCDC175P0C221 793 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 TTLL12Q14166 644 aaPredicted RBP20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 PYCARDQ9ULZ3 195 aa20.78■□□□□ 0.92
ATP2A2-201ENST00000308664 ADGRL2O95490 1459 aa20.77■□□□□ 0.92
ATP2A2-201ENST00000308664 CCDC194A0A1B0GVG4 234 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms