RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 RPS8P62241 208 aaKnown RBP9.72□□□□□ -0.85
TM4SF1-201ENST00000305366 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
TM4SF1-201ENST00000305366 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 SMC5Q8IY18 1101 aa9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 C8orf58Q8NAV2 365 aa9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 ANKIB1Q9P2G1 1089 aa9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 NOB1Q9ULX3 412 aaKnown RBP9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.85
TM4SF1-201ENST00000305366 KDM3BQ7LBC6 1761 aa9.71□□□□□ -0.86
TM4SF1-201ENST00000305366 HAX1O00165 279 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ECE2O60344 883 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 SEC24BO95487 1268 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 BECN1Q14457 450 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 TMC4Q7Z404 712 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ARHGAP45Q92619 1136 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ZC3H12CQ9C0D7 883 aaKnown RBP9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ZBTB40Q9NUA8 1239 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 EGFRP00533 1210 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 HOXB7P09629 217 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 GNAI1P63096 354 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 SAPCD2Q86UD0 394 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 TMEM57Q8N5G2 664 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 ZBTB38Q8NAP3 1195 aaPredicted RBP9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 TBC1D16Q8TBP0 767 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 EYA3Q99504 573 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 CHMP4BQ9H444 224 aaKnown RBP9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 IFT57Q9NWB7 429 aa9.7□□□□□ -0.86
TM4SF1-201ENST00000305366 UFL1O94874 794 aa9.69□□□□□ -0.86
TM4SF1-201ENST00000305366 TSPYL6Q8N831 410 aa9.69□□□□□ -0.86
TM4SF1-201ENST00000305366 CCDC85CA6NKD9 419 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 ADM5C9JUS6 153 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 IGSF3O75054 1194 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 KRT26Q7Z3Y9 468 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 ZC3H15Q8WU90 426 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 DCPSQ96C86 337 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 ZIC5Q96T25 663 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 CWC25Q9NXE8 425 aaPredicted RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 DICER1Q9UPY3 1922 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 WTIPA6NIX2 430 aaPredicted RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 VAMP4O75379 141 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 HUNKP57058 714 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 CCDC152Q4G0S7 254 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 CCDC30Q5VVM6 783 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 ABHD8Q96I13 439 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 PGAP2Q9UHJ9 254 aa9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 SCAF8Q9UPN6 1271 aaKnown RBP9.68□□□□□ -0.86
TM4SF1-201ENST00000305366 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 DLG5Q8TDM6 1919 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 SCN4AP35499 1836 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 NUP98P52948 1817 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 ASTN2O75129 1339 aaPredicted RBP9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 PDE8AO60658 829 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 NPM3O75607 178 aaKnown RBP9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 DDX58O95786 925 aaKnown RBP9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 ANKRD18AQ8IVF6 992 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 DPF2Q92785 391 aa9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 METTL22Q9BUU2 404 aaPredicted RBP9.67□□□□□ -0.86
TM4SF1-201ENST00000305366 ARFGEF2Q9Y6D5 1785 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 PI4KAP2A4QPH2 592 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 PCCAP05165 728 aaPredicted RBP9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 MAP2K2P36507 400 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 NUCB1Q02818 461 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 KIF4BQ2VIQ3 1234 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 PI4KAP1Q8N8J0 262 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 RTL9Q8NET4 1388 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 CDHR2Q9BYE9 1310 aa9.66□□□□□ -0.86
TM4SF1-201ENST00000305366 GSE1Q14687 1217 aa9.65□□□□□ -0.86
TM4SF1-201ENST00000305366 CWF19L2Q2TBE0 894 aaKnown RBP9.65□□□□□ -0.86
TM4SF1-201ENST00000305366 STK31Q9BXU1 1019 aa9.65□□□□□ -0.86
TM4SF1-201ENST00000305366 ZBTB7BO15156 539 aaPredicted RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 SLC4A2P04920 1241 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 RPS12P25398 132 aaKnown RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 ZNF157P51786 506 aaPredicted RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 NEXNQ0ZGT2 675 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 SCARF1Q14162 830 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 PRAMEF18Q5VWM3 479 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 KSR2Q6VAB6 950 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 G2E3Q7L622 706 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 SULF1Q8IWU6 871 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 MXD3Q9BW11 206 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 GBA2Q9HCG7 927 aaPredicted RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 GGA3Q9NZ52 723 aa9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.87
TM4SF1-201ENST00000305366 IGKV5-2P06315 115 aa9.64□□□□□ -0.87
TM4SF1-201ENST00000305366 ANGEL2Q5VTE6 544 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms