RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PCDHA7Q9UN72 937 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 CAMSAP1Q5T5Y3 1602 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 EFCAB8A8MWE9 144 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 ZNF202O95125 648 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 GYS2P54840 703 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 SCRN1Q12765 414 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 BAG1Q99933 345 aaPredicted RBP15.02□□□□□ -0.01
TRIM35-201ENST00000305364 EPC1Q9H2F5 836 aa15.02□□□□□ -0.01
TRIM35-201ENST00000305364 RNF216Q9NWF9 866 aaPredicted RBP15.02□□□□□ -0.01
TRIM35-201ENST00000305364 CYP2C19P33261 490 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 SEC62Q99442 399 aaKnown RBP15.01□□□□□ -0.01
TRIM35-201ENST00000305364 RCOR1Q9UKL0 485 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 NDUFA8P51970 172 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 SETQ01105 290 aaPredicted RBP15.01□□□□□ -0.01
TRIM35-201ENST00000305364 AKAP17AQ02040 695 aaKnown RBP15.01□□□□□ -0.01
TRIM35-201ENST00000305364 MYL5Q02045 173 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 ATL3Q6DD88 541 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 TLR7Q9NYK1 1049 aaKnown RBP15.01□□□□□ -0.01
TRIM35-201ENST00000305364 IVLP07476 585 aa15.01□□□□□ -0.01
TRIM35-201ENST00000305364 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
TRIM35-201ENST00000305364 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
TRIM35-201ENST00000305364 RHOXF2BP0C7M4 288 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 NLRP12P59046 1061 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 E4F1Q66K89 784 aaPredicted RBP15□□□□□ -0.01
TRIM35-201ENST00000305364 GPATCH11Q8N954 259 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 SMARCE1Q969G3 411 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 RHOXF2Q9BQY4 288 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 GOLPH3LQ9H4A5 285 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 DACH1Q9UI36 760 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 KLF18A0A0U1RQI7 1052 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 CCDC102BQ68D86 513 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 CAGE1Q8TC20 777 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 GBP3Q9H0R5 595 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 H0YHG0 523 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 ADALQ6DHV7 355 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 GPR161Q8N6U8 529 aaKnown RBP15□□□□□ -0.01
TRIM35-201ENST00000305364 ANKRD20A12PQ8NF67 263 aa15□□□□□ -0.01
TRIM35-201ENST00000305364 TAF5LO75529 589 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 IMMTQ16891 758 aaKnown RBP14.99□□□□□ -0.01
TRIM35-201ENST00000305364 CCDC70Q6NSX1 233 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 LINS1Q8NG48 757 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 SUCLG2Q96I99 432 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 IPO7O95373 1038 aaKnown RBP14.99□□□□□ -0.01
TRIM35-201ENST00000305364 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
TRIM35-201ENST00000305364 DHX40Q8IX18 779 aaKnown RBP14.99□□□□□ -0.01
TRIM35-201ENST00000305364 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
TRIM35-201ENST00000305364 ARHGAP6O43182 974 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 KCNQ3O43525 872 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 RASSF8Q8NHQ8 419 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 ST3GAL1Q11201 340 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 MTX1Q13505 466 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 TTC31Q49AM3 519 aaPredicted RBP14.98□□□□□ -0.01
TRIM35-201ENST00000305364 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 UBE3BQ7Z3V4 1068 aa14.98□□□□□ -0.01
TRIM35-201ENST00000305364 CCDC175P0C221 793 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ATP1A3P13637 1013 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 PPP2R2CQ9Y2T4 447 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 CD163L1Q9NR16 1453 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 IFIT1P09914 478 aaKnown RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 CHMP4BP1P59074 171 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 TFCP2Q12800 502 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ARMCX5Q6P1M9 558 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 DESI2Q9BSY9 194 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 POTEB2H3BUK9 544 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 CYP21A2P08686 494 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ANKLE2Q86XL3 938 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 NSUN7Q8NE18 718 aaKnown RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 PTPRMP28827 1452 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 WDHD1O75717 1129 aaPredicted RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ADKP55263 362 aaKnown RBP14.97□□□□□ -0.01
TRIM35-201ENST00000305364 ST5P78524 1137 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 HDXQ7Z353 690 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 RUFY1Q96T51 708 aa14.97□□□□□ -0.01
TRIM35-201ENST00000305364 MYO1CO00159 1063 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 SNRKQ9NRH2 765 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 RAI14Q9P0K7 980 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 PFKFB2O60825 505 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
TRIM35-201ENST00000305364 ZNF569Q5MCW4 686 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 SMARCC1Q92922 1105 aaPredicted RBP14.96□□□□□ -0.01
TRIM35-201ENST00000305364 CRACR2AQ9BSW2 395 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 CLIC4Q9Y696 253 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 PHLPP2Q6ZVD8 1323 aa14.96□□□□□ -0.01
TRIM35-201ENST00000305364 DBNDD2Q9BQY9 259 aa14.96□□□□□ -0.02
TRIM35-201ENST00000305364 NLRP2Q9NX02 1062 aa14.96□□□□□ -0.02
TRIM35-201ENST00000305364 CRB1P82279 1406 aa14.96□□□□□ -0.02
TRIM35-201ENST00000305364 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 ATP5J2-PTCD1G3V325 749 aa14.95□□□□□ -0.02
TRIM35-201ENST00000305364 PTCD1O75127 700 aaKnown RBP14.95□□□□□ -0.02
TRIM35-201ENST00000305364 ANO1Q5XXA6 986 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms