RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 CTAGE6Q86UF2 777 aa24.04■■□□□ 1.44
LETM1-201ENST00000302787 CTAGE4Q8IX94 777 aa24.04■■□□□ 1.44
LETM1-201ENST00000302787 SMC1AQ14683 1233 aaKnown RBP24.03■■□□□ 1.44
LETM1-201ENST00000302787 PTGS1P23219 599 aa24.03■■□□□ 1.44
LETM1-201ENST00000302787 DHX58Q96C10 678 aa24.03■■□□□ 1.44
LETM1-201ENST00000302787 UHRF1BP1Q6BDS2 1440 aa24.03■■□□□ 1.44
LETM1-201ENST00000302787 ZHX1Q9UKY1 873 aaPredicted RBP24.03■■□□□ 1.44
LETM1-201ENST00000302787 NFATC2IPQ8NCF5 419 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 TRIM75PA6NK02 468 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 TUBB4AP04350 444 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 HEATR3Q7Z4Q2 680 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 SYCP3Q8IZU3 236 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 SLU7O95391 586 aaKnown RBP24.02■■□□□ 1.44
LETM1-201ENST00000302787 NBPF6Q5VWK0 638 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 NAA16Q6N069 864 aaPredicted RBP24.02■■□□□ 1.44
LETM1-201ENST00000302787 NBPF5PQ86XG9 351 aaPredicted RBP24.02■■□□□ 1.44
LETM1-201ENST00000302787 NBPF4Q96M43 638 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 SCLT1Q96NL6 688 aa24.02■■□□□ 1.44
LETM1-201ENST00000302787 BICC1Q9H694 974 aaKnown RBP24.02■■□□□ 1.44
LETM1-201ENST00000302787 ARFGAP3Q9NP61 516 aa24.01■■□□□ 1.43
LETM1-201ENST00000302787 RNF216Q9NWF9 866 aaPredicted RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 KRI1Q8N9T8 703 aaKnown RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 TBCAO75347 108 aaKnown RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 IFI16Q16666 785 aaKnown RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 OTUD7AQ8TE49 926 aaPredicted RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
LETM1-201ENST00000302787 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
LETM1-201ENST00000302787 GNAQP50148 359 aa24■■□□□ 1.43
LETM1-201ENST00000302787 G2E3Q7L622 706 aa24■■□□□ 1.43
LETM1-201ENST00000302787 GIMAP7Q8NHV1 300 aa24■■□□□ 1.43
LETM1-201ENST00000302787 CABP5Q9NP86 173 aa24■■□□□ 1.43
LETM1-201ENST00000302787 PSMA7O14818 248 aa24■■□□□ 1.43
LETM1-201ENST00000302787 BRAPQ7Z569 592 aa24■■□□□ 1.43
LETM1-201ENST00000302787 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24■■□□□ 1.43
LETM1-201ENST00000302787 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
LETM1-201ENST00000302787 DNMT1P26358 1616 aaKnown RBP24■■□□□ 1.43
LETM1-201ENST00000302787 CCDC175P0C221 793 aa24■■□□□ 1.43
LETM1-201ENST00000302787 SRRTQ9BXP5 876 aaKnown RBP24■■□□□ 1.43
LETM1-201ENST00000302787 CPA1P15085 419 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 NGLY1Q96IV0 654 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 WDR7Q9Y4E6 1490 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 HSF2BPO75031 334 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 DNAI2Q9GZS0 605 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 RTL9Q8NET4 1388 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 HOOK3Q86VS8 718 aa23.99■■□□□ 1.43
LETM1-201ENST00000302787 MAGEB6P1A0A0J9YX57 407 aa23.98■■□□□ 1.43
LETM1-201ENST00000302787 GNAT2P19087 354 aa23.98■■□□□ 1.43
LETM1-201ENST00000302787 TRMT1LQ7Z2T5 733 aaKnown RBP23.98■■□□□ 1.43
LETM1-201ENST00000302787 ERMNQ8TAM6 284 aa23.98■■□□□ 1.43
LETM1-201ENST00000302787 GOLGA6L10A0A0M3HER8 536 aa23.98■■□□□ 1.43
LETM1-201ENST00000302787 ASIC1P78348 528 aa23.98■■□□□ 1.43
LETM1-201ENST00000302787 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.98■■□□□ 1.43
LETM1-201ENST00000302787 V9GYY5 206 aaPredicted RBP23.98■■□□□ 1.43
LETM1-201ENST00000302787 HOXC9P31274 260 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 RFC4P35249 363 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 SPAG5Q96R06 1193 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 CALM1P0DP23 149 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 CALM2P0DP24 149 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 CALM3P0DP25 149 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 CTNNA2P26232 953 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 FEZ1Q99689 392 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 IFNKQ9P0W0 207 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 IBSPP21815 317 aaPredicted RBP23.97■■□□□ 1.43
LETM1-201ENST00000302787 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
LETM1-201ENST00000302787 CEP112Q8N8E3 955 aa23.97■■□□□ 1.43
LETM1-201ENST00000302787 RNMTO43148 476 aaKnown RBP23.96■■□□□ 1.43
LETM1-201ENST00000302787 SAMM50Q9Y512 469 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 KRT2P35908 639 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 ATP6V1AP38606 617 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 CTAGE9A4FU28 777 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 NAPAP54920 295 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 DRC1Q96MC2 740 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
LETM1-201ENST00000302787 MMRN2Q9H8L6 949 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 MAP3K19Q56UN5 1328 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 RBSNQ9H1K0 784 aa23.96■■□□□ 1.43
LETM1-201ENST00000302787 CCDC172P0C7W6 258 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 TRIM35Q9UPQ4 493 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 RPS6KB1P23443 525 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 MAGEB6Q8N7X4 407 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 HELLSQ9NRZ9 838 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 ABCC10Q5T3U5 1492 aa23.95■■□□□ 1.42
LETM1-201ENST00000302787 IL13P35225 146 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 MCM6Q14566 821 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 ATL3Q6DD88 541 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 GOLGA1Q92805 767 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 NIP7Q9Y221 180 aaKnown RBP eCLIP23.94■■□□□ 1.42
LETM1-201ENST00000302787 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 UBE4AQ14139 1066 aa23.94■■□□□ 1.42
LETM1-201ENST00000302787 TACC1O75410 805 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 CALML3P27482 149 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 ST5P78524 1137 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 RXRAP19793 462 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 STX17P56962 302 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 TBC1D5Q92609 795 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 TRPM2O94759 1503 aa23.93■■□□□ 1.42
LETM1-201ENST00000302787 KIAA0753Q2KHM9 967 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms