RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 NUP88Q99567 741 aaPredicted RBP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 XBP1P17861 261 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 MATR3P43243 847 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 SPECC1Q5M775 1068 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 NRKQ7Z2Y5 1582 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 RABEP2Q9H5N1 569 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 KIAA1328Q86T90 577 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
PDGFD-201ENST00000302251 LGR6Q9HBX8 967 aa13.99□□□□□ -0.17
PDGFD-201ENST00000302251 A0A0D9SFI3 127 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 VPS37DQ86XT2 251 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 USP28Q96RU2 1077 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 OSBPL3Q9H4L5 887 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 LRRC7Q96NW7 1537 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 RGS12O14924 1447 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 RAD21O60216 631 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 TIMM10P62072 90 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 CERS3Q8IU89 383 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 CDKL5O76039 1030 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 GOLGA8FQ08AF8 430 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 GOLGA8DPQ0D2H9 430 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
PDGFD-201ENST00000302251 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
PDGFD-201ENST00000302251 ZNHIT6Q9NWK9 470 aaKnown RBP13.98□□□□□ -0.17
PDGFD-201ENST00000302251 SPATA31D1Q6ZQQ2 1576 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
PDGFD-201ENST00000302251 CABP4P57796 275 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 C11orf57Q6ZUT1 292 aaPredicted RBP13.97□□□□□ -0.17
PDGFD-201ENST00000302251 AK9Q5TCS8 1911 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 RDXP35241 583 aaKnown RBP13.97□□□□□ -0.17
PDGFD-201ENST00000302251 TFCP2Q12800 502 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 CCDC181Q5TID7 509 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 DHX32Q7L7V1 743 aaKnown RBP13.97□□□□□ -0.17
PDGFD-201ENST00000302251 KCNG4Q8TDN1 519 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
PDGFD-201ENST00000302251 ALG1Q9BT22 464 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
PDGFD-201ENST00000302251 KCNQ3O43525 872 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
PDGFD-201ENST00000302251 TDO2P48775 406 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 FANCCQ00597 558 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 PPARDQ03181 441 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDGFD-201ENST00000302251 C3P01024 1663 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 KIAA0754O94854 1291 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 SSH3Q8TE77 659 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 CCDC47Q96A33 483 aaKnown RBP13.96□□□□□ -0.17
PDGFD-201ENST00000302251 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
PDGFD-201ENST00000302251 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
PDGFD-201ENST00000302251 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.18
PDGFD-201ENST00000302251 FBXO38Q6PIJ6 1188 aa13.96□□□□□ -0.18
PDGFD-201ENST00000302251 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 DBNDD2Q9BQY9 259 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 FAM107BQ9H098 131 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 TOPAZ1Q8N9V7 1692 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 OAS2P29728 719 aaKnown RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 DNAJC21Q5F1R6 531 aaKnown RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 KCNF1Q9H3M0 494 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 USP27XA6NNY8 438 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 ENOX2Q16206 610 aaKnown RBP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.95□□□□□ -0.18
PDGFD-201ENST00000302251 FKBP15Q5T1M5 1219 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 GDAP1L1Q96MZ0 367 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 ST7Q9NRC1 585 aa13.95□□□□□ -0.18
PDGFD-201ENST00000302251 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 N4BP3O15049 544 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 CCDC144BQ3MJ40 725 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 IL17REQ8NFR9 667 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
PDGFD-201ENST00000302251 RASSF4Q9H2L5 321 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 EVA1CP58658 441 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 LINS1Q8NG48 757 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 PRC1O43663 620 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 ZNF202O95125 648 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 GOLGA1Q92805 767 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 DRC1Q96MC2 740 aa13.94□□□□□ -0.18
PDGFD-201ENST00000302251 UBAC1Q9BSL1 405 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms