RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.36
SMG8-201ENST00000300917 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.36
SMG8-201ENST00000300917 SH3TC1Q8TE82 1336 aa17.33■□□□□ 0.36
SMG8-201ENST00000300917 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 UTP14AQ9BVJ6 771 aaKnown RBP17.32■□□□□ 0.36
SMG8-201ENST00000300917 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 HMG20BQ9P0W2 317 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 F13A1P00488 732 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 APPP05067 770 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 CDCA7Q9BWT1 371 aaPredicted RBP17.32■□□□□ 0.36
SMG8-201ENST00000300917 NCOA5Q9HCD5 579 aaKnown RBP17.32■□□□□ 0.36
SMG8-201ENST00000300917 EP400Q96L91 3159 aa17.32■□□□□ 0.36
SMG8-201ENST00000300917 GTF2E1P29083 439 aaPredicted RBP17.31■□□□□ 0.36
SMG8-201ENST00000300917 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 MTMR6Q9Y217 621 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 ERVV-1B6SEH8 477 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 PDE8BO95263 885 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 CDHR2Q9BYE9 1310 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 CCDC102BQ68D86 513 aa17.31■□□□□ 0.36
SMG8-201ENST00000300917 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
SMG8-201ENST00000300917 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
SMG8-201ENST00000300917 KDM4AO75164 1064 aa17.3■□□□□ 0.36
SMG8-201ENST00000300917 LINC00116Q8NCU8 138 aa17.3■□□□□ 0.36
SMG8-201ENST00000300917 PIH1D3Q9NQM4 214 aaKnown RBP17.3■□□□□ 0.36
SMG8-201ENST00000300917 E7EWF7 191 aa17.3■□□□□ 0.36
SMG8-201ENST00000300917 TFIP11Q9UBB9 837 aaKnown RBP17.3■□□□□ 0.36
SMG8-201ENST00000300917 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
SMG8-201ENST00000300917 KRT32Q14532 448 aa17.29■□□□□ 0.36
SMG8-201ENST00000300917 DENND2AQ9ULE3 1009 aa17.29■□□□□ 0.36
SMG8-201ENST00000300917 AHDC1Q5TGY3 1603 aaPredicted RBP17.29■□□□□ 0.36
SMG8-201ENST00000300917 DOT1LQ8TEK3 1739 aa17.29■□□□□ 0.36
SMG8-201ENST00000300917 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
SMG8-201ENST00000300917 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
SMG8-201ENST00000300917 LTBP4Q8N2S1 1624 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 GPAA1O43292 621 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
SMG8-201ENST00000300917 ANKRD1Q15327 319 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 FGAP02671 866 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 BCAMP50895 628 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 GUCY1B3Q02153 619 aa17.28■□□□□ 0.36
SMG8-201ENST00000300917 PHF14O94880 888 aa17.27■□□□□ 0.36
SMG8-201ENST00000300917 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
SMG8-201ENST00000300917 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
SMG8-201ENST00000300917 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.36
SMG8-201ENST00000300917 INCENPQ9NQS7 918 aa17.27■□□□□ 0.35
SMG8-201ENST00000300917 USP21Q9UK80 565 aa17.27■□□□□ 0.35
SMG8-201ENST00000300917 FOXP2O15409 715 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 SCRN1Q12765 414 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
SMG8-201ENST00000300917 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 GOLGB1Q14789 3259 aaKnown RBP17.26■□□□□ 0.35
SMG8-201ENST00000300917 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.26■□□□□ 0.35
SMG8-201ENST00000300917 SLIT2O94813 1529 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 LRP6O75581 1613 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
SMG8-201ENST00000300917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.25■□□□□ 0.35
SMG8-201ENST00000300917 NPHP1O15259 732 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
SMG8-201ENST00000300917 PUM3Q15397 648 aaKnown RBP17.25■□□□□ 0.35
SMG8-201ENST00000300917 TSGA10IPQ3SY00 556 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 APPBP2Q92624 585 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 JCADQ9P266 1359 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 TCHHQ07283 1943 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 NTSR2O95665 410 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
SMG8-201ENST00000300917 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 FAM184AQ8NB25 1140 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
SMG8-201ENST00000300917 GNPATO15228 680 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 MBD3O95983 291 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 RASGRF1Q13972 1273 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 H3BQV1 296 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 IFFO2Q5TF58 517 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 AMIGO3Q86WK7 504 aa17.24■□□□□ 0.35
SMG8-201ENST00000300917 IMMTQ16891 758 aaKnown RBP17.23■□□□□ 0.35
SMG8-201ENST00000300917 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 NKX2-3Q8TAU0 364 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 LPIN2Q92539 896 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
SMG8-201ENST00000300917 SLC5A1P13866 664 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 RXRAP19793 462 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 MIGA1Q8NAN2 632 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
SMG8-201ENST00000300917 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 CHRNDQ07001 517 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 TBC1D9BQ66K14 1250 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 UBE2Q2Q8WVN8 375 aa17.23■□□□□ 0.35
SMG8-201ENST00000300917 PDE6AP16499 860 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 SLC51AQ86UW1 340 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 JAG2Q9Y219 1238 aa17.22■□□□□ 0.35
SMG8-201ENST00000300917 RFX7Q2KHR2 1363 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms