RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 MAP3K21Q5TCX8 1036 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 UTP14AQ9BVJ6 771 aaKnown RBP12.77□□□□□ -0.36
GCN1-201ENST00000300648 CALM1P0DP23 149 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 CALM2P0DP24 149 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 CALM3P0DP25 149 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.36
GCN1-201ENST00000300648 PPFIA3O75145 1194 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 RNF168Q8IYW5 571 aaPredicted RBP12.77□□□□□ -0.37
GCN1-201ENST00000300648 CFAP157Q5JU67 520 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 RUFY4Q6ZNE9 571 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 PLCB1Q9NQ66 1216 aa12.77□□□□□ -0.37
GCN1-201ENST00000300648 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
GCN1-201ENST00000300648 GAS8O95995 478 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
GCN1-201ENST00000300648 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 KAT14Q9H8E8 782 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 ABCF2Q9UG63 623 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
GCN1-201ENST00000300648 STMN1P16949 149 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 IMPACTQ9P2X3 320 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 SNX16P57768 344 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 NUCB1Q02818 461 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 APBB1IPQ7Z5R6 666 aaPredicted RBP12.76□□□□□ -0.37
GCN1-201ENST00000300648 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
GCN1-201ENST00000300648 ZPR1O75312 459 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
GCN1-201ENST00000300648 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 HLA-DOAP06340 250 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 NUTM2AQ8IVF1 878 aaPredicted RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 TTF2Q9UNY4 1162 aaKnown RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 USP16Q9Y5T5 823 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 TPD52P55327 224 aaPredicted RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 PPFIA1Q13136 1202 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 B4DLN1 442 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 UQCRFS1P1P0C7P4 283 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 MRPL12P52815 198 aaKnown RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 CFAP74Q9C0B2 1584 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
GCN1-201ENST00000300648 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 VPS18Q9P253 973 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 SHANK2Q9UPX8 1470 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 GNAT2P19087 354 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 DNA2P51530 1060 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 PPP2R5EQ16537 467 aa12.75□□□□□ -0.37
GCN1-201ENST00000300648 MTMR3Q13615 1198 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 CEP120Q8N960 986 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 NAA25Q14CX7 972 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 NUDT16Q96DE0 195 aaKnown RBP12.74□□□□□ -0.37
GCN1-201ENST00000300648 HAUS2Q9NVX0 235 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 ZFYVE9O95405 1425 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 IDEP14735 1019 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 TYRO3Q06418 890 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 VCX3AQ9NNX9 186 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 ESR2Q92731 530 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 ZBTB17Q13105 803 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 IFT20Q8IY31 132 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 RPL13P26373 211 aaKnown RBP12.74□□□□□ -0.37
GCN1-201ENST00000300648 NEDD9Q14511 834 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 BOLA2Q9H3K6 86 aa12.74□□□□□ -0.37
GCN1-201ENST00000300648 LUC7L3O95232 432 aaKnown RBP12.73□□□□□ -0.37
GCN1-201ENST00000300648 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 RAB3IPQ96QF0 476 aaPredicted RBP12.73□□□□□ -0.37
GCN1-201ENST00000300648 FANCAO15360 1455 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 TRIM27P14373 513 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 PSMC4P43686 418 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 SEL1L2Q5TEA6 688 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 RRAGBQ5VZM2 374 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 SMC5Q8IY18 1101 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
GCN1-201ENST00000300648 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
GCN1-201ENST00000300648 PPIP5K1Q6PFW1 1433 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 F13A1P00488 732 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 NUF2Q9BZD4 464 aa12.73□□□□□ -0.37
GCN1-201ENST00000300648 BUB1BO60566 1050 aaPredicted RBP12.72□□□□□ -0.37
GCN1-201ENST00000300648 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 ATP6V0A2Q9Y487 856 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 INPP5BP32019 993 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 BIN1O00499 593 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 ZBTB43O43298 467 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 MRPS9P82933 396 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 730.5 ms