RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 STOX1Q6ZVD7 989 aa16■□□□□ 0.15
CDH8-201ENST00000299345 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
CDH8-201ENST00000299345 ZNF396Q96N95 335 aaPredicted RBP16■□□□□ 0.15
CDH8-201ENST00000299345 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
CDH8-201ENST00000299345 NCOA5Q9HCD5 579 aaKnown RBP16■□□□□ 0.15
CDH8-201ENST00000299345 FBXO3Q9UK99 471 aa16■□□□□ 0.15
CDH8-201ENST00000299345 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16■□□□□ 0.15
CDH8-201ENST00000299345 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
CDH8-201ENST00000299345 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 DHX16O60231 1041 aaKnown RBP15.99■□□□□ 0.15
CDH8-201ENST00000299345 IDH1O75874 414 aaKnown RBP15.99■□□□□ 0.15
CDH8-201ENST00000299345 ZAP70P43403 619 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 EXOC5O00471 708 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 TYRO3Q06418 890 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 ZRSR1Q15695 479 aaKnown RBP15.99■□□□□ 0.15
CDH8-201ENST00000299345 TICAM2Q86XR7 235 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 SPC24Q8NBT2 197 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 OSBP2Q969R2 916 aa15.99■□□□□ 0.15
CDH8-201ENST00000299345 COL5A2P05997 1499 aaPredicted RBP15.99■□□□□ 0.15
CDH8-201ENST00000299345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
CDH8-201ENST00000299345 ZNF213O14771 459 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 ITGA6P23229 1130 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 GIGYF2Q6Y7W6 1299 aaKnown RBP15.98■□□□□ 0.15
CDH8-201ENST00000299345 FAM200AQ8TCP9 573 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
CDH8-201ENST00000299345 TBC1D2BQ9UPU7 963 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 M0R2C6 588 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
CDH8-201ENST00000299345 MAP3K15Q6ZN16 1313 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 JCADQ9P266 1359 aa15.98■□□□□ 0.15
CDH8-201ENST00000299345 ME1P48163 572 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 APPBP2Q92624 585 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 TCHHQ07283 1943 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 CRYBG1Q9Y4K1 1723 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 ABCC6O95255 1503 aa15.97■□□□□ 0.15
CDH8-201ENST00000299345 NSUN7Q8NE18 718 aaKnown RBP15.97■□□□□ 0.15
CDH8-201ENST00000299345 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDH8-201ENST00000299345 TTC12Q9H892 705 aaPredicted RBP15.97■□□□□ 0.15
CDH8-201ENST00000299345 HSP90AA2PQ14568 343 aaPredicted RBP15.97■□□□□ 0.15
CDH8-201ENST00000299345 RESTQ13127 1097 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 GOLGA6L19H0YKK7 550 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 KINO60870 393 aaKnown RBP15.96■□□□□ 0.15
CDH8-201ENST00000299345 NAA16Q6N069 864 aaPredicted RBP15.96■□□□□ 0.15
CDH8-201ENST00000299345 NCOA7Q8NI08 942 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 PRC1O43663 620 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 ANO6Q4KMQ2 910 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 SLC9C2Q5TAH2 1124 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 TRIM5Q9C035 493 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 GREM2Q9H772 168 aa15.96■□□□□ 0.15
CDH8-201ENST00000299345 KLF18A0A0U1RQI7 1052 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 HLFQ16534 295 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
CDH8-201ENST00000299345 TPM3P06753 285 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 PDIA3P30101 505 aaKnown RBP15.95■□□□□ 0.14
CDH8-201ENST00000299345 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 CLSTN2Q9H4D0 955 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 COL18A1P39060 1754 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 A0A0G2JLW4 131 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 GPAA1O43292 621 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 FGAP02671 866 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 GNL2Q13823 731 aaKnown RBP15.95■□□□□ 0.14
CDH8-201ENST00000299345 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
CDH8-201ENST00000299345 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
CDH8-201ENST00000299345 NR1I2O75469 434 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 EXOSC10Q01780 885 aaKnown RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 TTF1Q15361 905 aaPredicted RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 CPLX2Q6PUV4 134 aaKnown RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 CCAR1Q8IX12 1150 aaKnown RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 SMARCC2Q8TAQ2 1214 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 C8orf76Q96K31 380 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 BECN2A8MW95 431 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 SCARF1Q14162 830 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
CDH8-201ENST00000299345 ZNF165P49910 485 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 CTSWP56202 376 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 SYNE3Q6ZMZ3 975 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 TTLL11Q8NHH1 800 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 MPHOSPH8Q99549 860 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
CDH8-201ENST00000299345 STK38Q15208 465 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 ORC3Q9UBD5 711 aaPredicted RBP15.93■□□□□ 0.14
CDH8-201ENST00000299345 HELBQ8NG08 1087 aaPredicted RBP15.93■□□□□ 0.14
CDH8-201ENST00000299345 SDF4Q9BRK5 362 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 FUCA2Q9BTY2 467 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 CSF1RP07333 972 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 PGBD1Q96JS3 809 aa15.93■□□□□ 0.14
CDH8-201ENST00000299345 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
CDH8-201ENST00000299345 AIDAQ96BJ3 306 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 PLA2G12BQ9BX93 195 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms