RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 KAT14Q9H8E8 782 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 CTNNA2P26232 953 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 AKR1B15C9JRZ8 316 aaPredicted RBP12.53□□□□□ -0.4
PBRM1-201ENST00000296302 PRC1O43663 620 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 RBM5P52756 815 aaKnown RBP eCLIP12.53□□□□□ -0.4
PBRM1-201ENST00000296302 CEP63Q96MT8 703 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
PBRM1-201ENST00000296302 GRM8O00222 908 aa12.52□□□□□ -0.4
PBRM1-201ENST00000296302 ELP1O95163 1332 aa12.52□□□□□ -0.4
PBRM1-201ENST00000296302 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 AFAP1L1Q8TED9 768 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 CUL5Q93034 780 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 LUC7L2Q9Y383 392 aaKnown RBP12.52□□□□□ -0.41
PBRM1-201ENST00000296302 A0A1W2PRG0 241 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 MPHOSPH10O00566 681 aaKnown RBP12.52□□□□□ -0.41
PBRM1-201ENST00000296302 SPATA24Q86W54 205 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 DHX58Q96C10 678 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.41
PBRM1-201ENST00000296302 TSPY2A6NKD2 308 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 ZEB2O60315 1214 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 ELF2Q15723 593 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
PBRM1-201ENST00000296302 IDI1Q13907 227 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 ESR2Q92731 530 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 CAPZA3Q96KX2 299 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 BICDL2A1A5D9 508 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 NEBLO76041 1014 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 SPTY2D1Q68D10 685 aaPredicted RBP12.51□□□□□ -0.41
PBRM1-201ENST00000296302 TBC1D5Q92609 795 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 CBX8Q9HC52 389 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 IL15P40933 162 aaPredicted RBP12.51□□□□□ -0.41
PBRM1-201ENST00000296302 UBXN1Q04323 297 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 TTF2Q9UNY4 1162 aaKnown RBP12.51□□□□□ -0.41
PBRM1-201ENST00000296302 AOX1Q06278 1338 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
PBRM1-201ENST00000296302 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 TNNC1P63316 161 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 DNAI2Q9GZS0 605 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 EHMT1Q9H9B1 1298 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 HOMER2Q9NSB8 354 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 CHMP4BP1P59074 171 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 NAPGQ99747 312 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 TRIM14Q14142 442 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
PBRM1-201ENST00000296302 MMRN2Q9H8L6 949 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 PHF8Q9UPP1 1060 aa12.5□□□□□ -0.41
PBRM1-201ENST00000296302 GNAQP50148 359 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 DNAJC21Q5F1R6 531 aaKnown RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 C17orf53Q8N3J3 647 aaPredicted RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 LLPHQ9BRT6 129 aaKnown RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 CARD6Q9BX69 1037 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 A0A1B0GUA9 196 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 ASIC1P78348 528 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 ANXA1P04083 346 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 LDHCP07864 332 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 TBCAO75347 108 aaKnown RBP12.49□□□□□ -0.41
PBRM1-201ENST00000296302 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
PBRM1-201ENST00000296302 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
PBRM1-201ENST00000296302 BRD1O95696 1058 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 PPP4R3AQ6IN85 833 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 SCLT1Q96NL6 688 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 STX17P56962 302 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
PBRM1-201ENST00000296302 ERMNQ8TAM6 284 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 TMOD2Q9NZR1 351 aa12.48□□□□□ -0.41
PBRM1-201ENST00000296302 RNF113AO15541 343 aaKnown RBP12.48□□□□□ -0.41
PBRM1-201ENST00000296302 IQUBQ8NA54 791 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms