RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SLC5A1P13866 664 aa18.6■□□□□ 0.57
CCDC140-201ENST00000295226 UBE4AQ14139 1066 aa18.6■□□□□ 0.57
CCDC140-201ENST00000295226 PODXL2Q9NZ53 605 aa18.6■□□□□ 0.57
CCDC140-201ENST00000295226 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
CCDC140-201ENST00000295226 ATP2B4P23634 1241 aa18.59■□□□□ 0.57
CCDC140-201ENST00000295226 GYG1P46976 350 aa18.59■□□□□ 0.57
CCDC140-201ENST00000295226 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
CCDC140-201ENST00000295226 RIMBP2O15034 1052 aa18.58■□□□□ 0.57
CCDC140-201ENST00000295226 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.57
CCDC140-201ENST00000295226 BCAMP50895 628 aa18.58■□□□□ 0.57
CCDC140-201ENST00000295226 CCDC93Q567U6 631 aa18.58■□□□□ 0.57
CCDC140-201ENST00000295226 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.56
CCDC140-201ENST00000295226 GORABQ5T7V8 394 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 SNED1Q8TER0 1413 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 DUOX1Q9NRD9 1551 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 PHKA1P46020 1223 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 CC2D2BQ6DHV5 1058 aa18.57■□□□□ 0.56
CCDC140-201ENST00000295226 IRS2Q9Y4H2 1338 aa18.56■□□□□ 0.56
CCDC140-201ENST00000295226 UTRNP46939 3433 aa18.56■□□□□ 0.56
CCDC140-201ENST00000295226 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC140-201ENST00000295226 MX1P20591 662 aa18.56■□□□□ 0.56
CCDC140-201ENST00000295226 PDE1AP54750 535 aa18.56■□□□□ 0.56
CCDC140-201ENST00000295226 FAM84BQ96KN1 310 aaPredicted RBP18.56■□□□□ 0.56
CCDC140-201ENST00000295226 IQSEC3Q9UPP2 1182 aaPredicted RBP18.56■□□□□ 0.56
CCDC140-201ENST00000295226 CCDC102BQ68D86 513 aa18.55■□□□□ 0.56
CCDC140-201ENST00000295226 RTKN2Q8IZC4 609 aa18.55■□□□□ 0.56
CCDC140-201ENST00000295226 ZNF277Q9NRM2 450 aaPredicted RBP18.55■□□□□ 0.56
CCDC140-201ENST00000295226 WASHC4Q2M389 1173 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 NDUFB9Q9Y6M9 179 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 NFKBIEO00221 500 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 RASSF7Q02833 373 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 DOK7Q18PE1 504 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
CCDC140-201ENST00000295226 BOLA2Q9H3K6 86 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
CCDC140-201ENST00000295226 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
CCDC140-201ENST00000295226 HIBADHP31937 336 aaKnown RBP18.53■□□□□ 0.56
CCDC140-201ENST00000295226 SCARF1Q14162 830 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 AOC3Q16853 763 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 CCDC158Q5M9N0 1113 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 SOGA3Q5TF21 947 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 ARHGAP27Q6ZUM4 889 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 VPS37DQ86XT2 251 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 ZC3H12CQ9C0D7 883 aaKnown RBP18.53■□□□□ 0.56
CCDC140-201ENST00000295226 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
CCDC140-201ENST00000295226 ARFGEF1Q9Y6D6 1849 aa18.52■□□□□ 0.56
CCDC140-201ENST00000295226 FKBP4Q02790 459 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC140-201ENST00000295226 CAVIN4Q5BKX8 364 aa18.52■□□□□ 0.56
CCDC140-201ENST00000295226 PI16Q6UXB8 463 aa18.52■□□□□ 0.56
CCDC140-201ENST00000295226 PI4K2BQ8TCG2 481 aa18.52■□□□□ 0.56
CCDC140-201ENST00000295226 SNRKQ9NRH2 765 aa18.52■□□□□ 0.56
CCDC140-201ENST00000295226 ARAP2Q8WZ64 1704 aa18.52■□□□□ 0.55
CCDC140-201ENST00000295226 GPATCH3Q96I76 525 aa18.51■□□□□ 0.55
CCDC140-201ENST00000295226 PSMD1Q99460 953 aa18.51■□□□□ 0.55
CCDC140-201ENST00000295226 JAG2Q9Y219 1238 aa18.51■□□□□ 0.55
CCDC140-201ENST00000295226 FER1L6Q2WGJ9 1857 aa18.51■□□□□ 0.55
CCDC140-201ENST00000295226 PPIP5K2O43314 1243 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 PRELPP51888 382 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 GPR162Q16538 588 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 C15orf52Q6ZUT6 534 aaKnown RBP18.5■□□□□ 0.55
CCDC140-201ENST00000295226 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
CCDC140-201ENST00000295226 EYA3Q99504 573 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 TAOK3Q9H2K8 898 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 DBNDD1Q9H9R9 158 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 ATP5JP18859 108 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 MCAMP43121 646 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 GRIPAP1Q4V328 841 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 SUPT20HQ8NEM7 779 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 CD209Q9NNX6 404 aa18.5■□□□□ 0.55
CCDC140-201ENST00000295226 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
CCDC140-201ENST00000295226 RASGRF1Q13972 1273 aa18.49■□□□□ 0.55
CCDC140-201ENST00000295226 ZNF804AQ7Z570 1209 aa18.49■□□□□ 0.55
CCDC140-201ENST00000295226 OSBPL3Q9H4L5 887 aa18.49■□□□□ 0.55
CCDC140-201ENST00000295226 KCNQ5Q9NR82 932 aa18.49■□□□□ 0.55
CCDC140-201ENST00000295226 G3V3G9 751 aa18.48■□□□□ 0.55
CCDC140-201ENST00000295226 FRAT2O75474 233 aaPredicted RBP18.48■□□□□ 0.55
CCDC140-201ENST00000295226 GSPT1P15170 499 aaKnown RBP18.48■□□□□ 0.55
CCDC140-201ENST00000295226 ARID4AP29374 1257 aaPredicted RBP18.48■□□□□ 0.55
CCDC140-201ENST00000295226 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
CCDC140-201ENST00000295226 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
CCDC140-201ENST00000295226 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
CCDC140-201ENST00000295226 CHD4Q14839 1912 aa18.48■□□□□ 0.55
CCDC140-201ENST00000295226 GLRX3O76003 335 aaKnown RBP18.47■□□□□ 0.55
CCDC140-201ENST00000295226 ZAP70P43403 619 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 CHAF1AQ13111 956 aaPredicted RBP18.47■□□□□ 0.55
CCDC140-201ENST00000295226 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 LARGE2Q8N3Y3 721 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 HMG20BQ9P0W2 317 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 COL4A5P29400 1685 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 ERC2O15083 957 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 IARSP41252 1262 aaKnown RBP18.47■□□□□ 0.55
CCDC140-201ENST00000295226 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
CCDC140-201ENST00000295226 ANTXR1Q9H6X2 564 aa18.47■□□□□ 0.55
CCDC140-201ENST00000295226 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
CCDC140-201ENST00000295226 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms