RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 AK2P54819 239 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 BCL11BQ9C0K0 894 aaPredicted RBP16.82■□□□□ 0.28
ABCF3-201ENST00000292808 SNAP23O00161 211 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 KCNJ4P48050 445 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 FKBP4Q02790 459 aaKnown RBP eCLIP16.81■□□□□ 0.28
ABCF3-201ENST00000292808 KLHL40Q2TBA0 621 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 FAM43AQ8N2R8 423 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 RTN4Q9NQC3 1192 aaKnown RBP16.81■□□□□ 0.28
ABCF3-201ENST00000292808 MAST3O60307 1309 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
ABCF3-201ENST00000292808 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
ABCF3-201ENST00000292808 ZNF512BQ96KM6 892 aaPredicted RBP16.81■□□□□ 0.28
ABCF3-201ENST00000292808 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 UBR3Q6ZT12 1888 aa16.81■□□□□ 0.28
ABCF3-201ENST00000292808 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
ABCF3-201ENST00000292808 INTS4Q96HW7 963 aaKnown RBP16.8■□□□□ 0.28
ABCF3-201ENST00000292808 GRPEL1Q9HAV7 217 aa16.8■□□□□ 0.28
ABCF3-201ENST00000292808 PHKA1P46020 1223 aa16.8■□□□□ 0.28
ABCF3-201ENST00000292808 VPS53Q5VIR6 699 aa16.8■□□□□ 0.28
ABCF3-201ENST00000292808 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
ABCF3-201ENST00000292808 RTCBQ9Y3I0 505 aaKnown RBP16.8■□□□□ 0.28
ABCF3-201ENST00000292808 EP400Q96L91 3159 aa16.8■□□□□ 0.28
ABCF3-201ENST00000292808 M0R2C6 588 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 SF3B3Q15393 1217 aaKnown RBP16.79■□□□□ 0.28
ABCF3-201ENST00000292808 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 SLC10A5Q5PT55 438 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
ABCF3-201ENST00000292808 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-201ENST00000292808 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
ABCF3-201ENST00000292808 LPIN2Q92539 896 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 MPHOSPH8Q99549 860 aa16.79■□□□□ 0.28
ABCF3-201ENST00000292808 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
ABCF3-201ENST00000292808 LARGE1O95461 756 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
ABCF3-201ENST00000292808 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 LMBRD1Q9NUN5 540 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 HMG20BQ9P0W2 317 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 DOCK2Q92608 1830 aa16.78■□□□□ 0.28
ABCF3-201ENST00000292808 FOXP2O15409 715 aa16.77■□□□□ 0.28
ABCF3-201ENST00000292808 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
ABCF3-201ENST00000292808 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
ABCF3-201ENST00000292808 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
ABCF3-201ENST00000292808 ZPR1O75312 459 aa16.77■□□□□ 0.27
ABCF3-201ENST00000292808 CYP21A2P08686 494 aa16.77■□□□□ 0.27
ABCF3-201ENST00000292808 IGHMBP2P38935 993 aaKnown RBP16.77■□□□□ 0.27
ABCF3-201ENST00000292808 RNF20Q5VTR2 975 aa16.77■□□□□ 0.27
ABCF3-201ENST00000292808 PIH1D3Q9NQM4 214 aaKnown RBP16.77■□□□□ 0.27
ABCF3-201ENST00000292808 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.27
ABCF3-201ENST00000292808 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 CHRNDQ07001 517 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 PANK2Q9BZ23 570 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 PHF14O94880 888 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 BRD1O95696 1058 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
ABCF3-201ENST00000292808 ST3GAL1Q11201 340 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 SETDB2Q96T68 719 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 DSCC1Q9BVC3 393 aa16.76■□□□□ 0.27
ABCF3-201ENST00000292808 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
ABCF3-201ENST00000292808 SLC5A1P13866 664 aa16.75■□□□□ 0.27
ABCF3-201ENST00000292808 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
ABCF3-201ENST00000292808 STOX1Q6ZVD7 989 aa16.75■□□□□ 0.27
ABCF3-201ENST00000292808 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
ABCF3-201ENST00000292808 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
ABCF3-201ENST00000292808 WTIPA6NIX2 430 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 RPS6KB1P23443 525 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 NBPF5PQ86XG9 351 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 PSMA5P28066 241 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 RASGRF1Q13972 1273 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
ABCF3-201ENST00000292808 PUS7LQ9H0K6 701 aaKnown RBP16.74■□□□□ 0.27
ABCF3-201ENST00000292808 TRIM37O94972 964 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 APPBP2Q92624 585 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 DTNBO60941 627 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 ADD2P35612 726 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-201ENST00000292808 FOXD4L6Q3SYB3 417 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-201ENST00000292808 BLOC1S2Q6QNY1 142 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 FOXD4L3Q6VB84 417 aaPredicted RBP16.73■□□□□ 0.27
ABCF3-201ENST00000292808 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
ABCF3-201ENST00000292808 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-201ENST00000292808 RFC4P35249 363 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 ZNF445P59923 1031 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 NFIXQ14938 502 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 ALDH8A1Q9H2A2 487 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-201ENST00000292808 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
ABCF3-201ENST00000292808 BCAMP50895 628 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms