RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 LMBR1LQ6UX01 489 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
HMHB1-201ENST00000289448 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 LEMD3Q9Y2U8 911 aa12.12□□□□□ -0.47
HMHB1-201ENST00000289448 ZNF804BA4D1E1 1349 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
HMHB1-201ENST00000289448 TAF5LO75529 589 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 SCARF1Q14162 830 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 HELBQ8NG08 1087 aaPredicted RBP12.11□□□□□ -0.47
HMHB1-201ENST00000289448 AIDAQ96BJ3 306 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
HMHB1-201ENST00000289448 ANKRD2Q9GZV1 360 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 COA1Q9GZY4 146 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 GGA3Q9NZ52 723 aa12.11□□□□□ -0.47
HMHB1-201ENST00000289448 E9PSI1 815 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 ECE1P42892 770 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 CTCFP49711 727 aaPredicted RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 LBX1P52954 281 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 IFIT5Q13325 482 aaKnown RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 DCPSQ96C86 337 aaKnown RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 SRCIN1Q9C0H9 1055 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 MYOZ2Q9NPC6 264 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 SCAF8Q9UPN6 1271 aaKnown RBP12.1□□□□□ -0.47
HMHB1-201ENST00000289448 CHMP3Q9Y3E7 222 aa12.1□□□□□ -0.47
HMHB1-201ENST00000289448 NBPF7P0C2Y1 421 aaPredicted RBP12.09□□□□□ -0.47
HMHB1-201ENST00000289448 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 ANGEL2Q5VTE6 544 aaKnown RBP12.09□□□□□ -0.47
HMHB1-201ENST00000289448 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 HHIPL1Q96JK4 782 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
HMHB1-201ENST00000289448 PSME4Q14997 1843 aa12.09□□□□□ -0.47
HMHB1-201ENST00000289448 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 MAP2K2P36507 400 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 KCNJ4P48050 445 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 HUNKP57058 714 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 NBPF9Q3BBW0 867 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 TTLL5Q6EMB2 1281 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 TRMT2AQ8IZ69 625 aaKnown RBP12.08□□□□□ -0.48
HMHB1-201ENST00000289448 CDCA5Q96FF9 252 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 CD209Q9NNX6 404 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 ZNF646O15015 1829 aaPredicted RBP12.08□□□□□ -0.48
HMHB1-201ENST00000289448 UTYO14607 1347 aa12.08□□□□□ -0.48
HMHB1-201ENST00000289448 CAPN15O75808 1086 aa12.07□□□□□ -0.48
HMHB1-201ENST00000289448 GTF2IP78347 998 aa12.07□□□□□ -0.48
HMHB1-201ENST00000289448 CCDC57Q2TAC2 916 aa12.07□□□□□ -0.48
HMHB1-201ENST00000289448 LDHAL6AQ6ZMR3 332 aa12.07□□□□□ -0.48
HMHB1-201ENST00000289448 C15orf52Q6ZUT6 534 aaKnown RBP12.07□□□□□ -0.48
HMHB1-201ENST00000289448 PUS3Q9BZE2 481 aaKnown RBP12.07□□□□□ -0.48
HMHB1-201ENST00000289448 GBA2Q9HCG7 927 aaPredicted RBP12.07□□□□□ -0.48
HMHB1-201ENST00000289448 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
HMHB1-201ENST00000289448 PLIN1O60240 522 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 PRAMEF18Q5VWM3 479 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 KIAA0825Q8IV33 1275 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 CERS5Q8N5B7 392 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 ANKRD44Q8N8A2 993 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 TSKSQ9UJT2 592 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 PTPRCP08575 1304 aa12.06□□□□□ -0.48
HMHB1-201ENST00000289448 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 WNT10BO00744 389 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 SASH1O94885 1247 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 IL1R1P14778 569 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
HMHB1-201ENST00000289448 TAF7LQ5H9L4 462 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 DIEXFQ68CQ4 756 aaKnown RBP12.05□□□□□ -0.48
HMHB1-201ENST00000289448 RGMBQ6NW40 437 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 MOB2Q70IA6 237 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 C2orf69Q8N8R5 385 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 ZBED3Q96IU2 234 aaPredicted RBP12.05□□□□□ -0.48
HMHB1-201ENST00000289448 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
HMHB1-201ENST00000289448 CNNM1Q9NRU3 951 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 PITPNM2Q9BZ72 1349 aa12.05□□□□□ -0.48
HMHB1-201ENST00000289448 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
HMHB1-201ENST00000289448 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
HMHB1-201ENST00000289448 JAG2Q9Y219 1238 aa12.04□□□□□ -0.48
HMHB1-201ENST00000289448 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
HMHB1-201ENST00000289448 PCDHAC2Q9Y5I4 1007 aa12.04□□□□□ -0.48
HMHB1-201ENST00000289448 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 ZNF157P51786 506 aaPredicted RBP12.03□□□□□ -0.48
HMHB1-201ENST00000289448 NOGQ13253 232 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 ALDH1L2Q3SY69 923 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 LRRC24Q50LG9 513 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 ZNF804AQ7Z570 1209 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
HMHB1-201ENST00000289448 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms