RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.76
PTPDC1-201ENST00000288976 PSME4Q14997 1843 aa10.27□□□□□ -0.76
PTPDC1-201ENST00000288976 SLX4Q8IY92 1834 aa10.27□□□□□ -0.76
PTPDC1-201ENST00000288976 FBXW7Q969H0 707 aa10.27□□□□□ -0.76
PTPDC1-201ENST00000288976 CCDC85AQ96PX6 553 aaPredicted RBP10.27□□□□□ -0.76
PTPDC1-201ENST00000288976 GLRX3O76003 335 aaKnown RBP10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 ATP5JP18859 108 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 FER1L6Q2WGJ9 1857 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 A0A1B0GUL7 405 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 SEMA3EO15041 775 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 ARID4AP29374 1257 aaPredicted RBP10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 NBR1Q14596 966 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 SPON1Q9HCB6 807 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 TOMM22Q9NS69 142 aa10.27□□□□□ -0.77
PTPDC1-201ENST00000288976 ZBTB7AO95365 584 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 VPS33BQ9H267 617 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 IL1RAPL2Q9NP60 686 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 IFIT1P09914 478 aaKnown RBP10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 UQCRFS1P1P0C7P4 283 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 RTFDC1Q9BY42 306 aaPredicted RBP10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 DBNLQ9UJU6 430 aaKnown RBP10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 AKAP11Q9UKA4 1901 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 MYH7P12883 1935 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 PLCB2Q00722 1185 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 TMED8Q6PL24 325 aaPredicted RBP10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 ZNF804BA4D1E1 1349 aa10.26□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC158Q5M9N0 1113 aa10.25□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
PTPDC1-201ENST00000288976 XAGE2Q96GT9 111 aa10.25□□□□□ -0.77
PTPDC1-201ENST00000288976 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.25□□□□□ -0.77
PTPDC1-201ENST00000288976 SOCS7O14512 581 aa10.25□□□□□ -0.77
PTPDC1-201ENST00000288976 C16orf71Q8IYS4 520 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 SUPT20HQ8NEM7 779 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 KCNA3P22001 575 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 OTUD7AQ8TE49 926 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 GPSM2P81274 684 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 HAUS7Q99871 368 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 GGA1Q9UJY5 639 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 ATF5Q9Y2D1 282 aaPredicted RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 TTLL6Q8N841 843 aa10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 GNL3LQ9NVN8 582 aaKnown RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
PTPDC1-201ENST00000288976 GSPT1P15170 499 aaKnown RBP10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 TTC39AQ5SRH9 613 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 DBNDD2Q9BQY9 259 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 RTKN2Q8IZC4 609 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 EVI5LQ96CN4 794 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 PIM2Q9P1W9 311 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 DPEP1P16444 411 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 CAVIN4Q5BKX8 364 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 FBXO33Q7Z6M2 555 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 PSMD1Q99460 953 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 EYA3Q99504 573 aa10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC8Q9H0W5 538 aaPredicted RBP10.23□□□□□ -0.77
PTPDC1-201ENST00000288976 LTBP3Q9NS15 1303 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 HIP1O00291 1037 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 SALL1Q9NSC2 1324 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 TTF1Q15361 905 aaPredicted RBP10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 ZNF804AQ7Z570 1209 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 ANKIB1Q9P2G1 1089 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC93Q567U6 631 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 NEUROD6Q96NK8 337 aa10.22□□□□□ -0.77
PTPDC1-201ENST00000288976 CDC45O75419 566 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 CHRNA5P30532 468 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC102BQ68D86 513 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 MPNDQ8N594 471 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 TAF5LO75529 589 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 CASC1Q6TDU7 716 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 DENND2AQ9ULE3 1009 aa10.21□□□□□ -0.77
PTPDC1-201ENST00000288976 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 IL1R1P14778 569 aa10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 ADORA1P30542 326 aa10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 LRRFIP1Q32MZ4 808 aaKnown RBP10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 DALRD3Q5D0E6 543 aaKnown RBP10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 VPS53Q5VIR6 699 aa10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 EPB41L2O43491 1005 aaKnown RBP10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 TIMM10P62072 90 aa10.21□□□□□ -0.78
PTPDC1-201ENST00000288976 DICER1Q9UPY3 1922 aaKnown RBP10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 UFL1O94874 794 aa10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 DPP8Q6V1X1 898 aaPredicted RBP10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 COL1A1P02452 1464 aaPredicted RBP10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 RAD50Q92878 1312 aa10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 FAM84BQ96KN1 310 aaPredicted RBP10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 SDSP20132 328 aa10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 FKBP1AP62942 108 aaKnown RBP10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 PDE4CQ08493 712 aa10.2□□□□□ -0.78
PTPDC1-201ENST00000288976 HIBADHP31937 336 aaKnown RBP10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 COA1Q9GZY4 146 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 SNRKQ9NRH2 765 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 C8orf34Q49A92 452 aa10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 HELBQ8NG08 1087 aaPredicted RBP10.19□□□□□ -0.78
PTPDC1-201ENST00000288976 PAG1Q9NWQ8 432 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms