RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 RGMBQ6NW40 437 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 LINS1Q8NG48 757 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 MYOZ2Q9NPC6 264 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 LEMD3Q9Y2U8 911 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 COA1Q9GZY4 146 aa17.87■□□□□ 0.45
TPM1-202ENST00000288398 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
TPM1-202ENST00000288398 MYO3BQ8WXR4 1341 aa17.87■□□□□ 0.45
TPM1-202ENST00000288398 ZNF609O15014 1411 aa17.87■□□□□ 0.45
TPM1-202ENST00000288398 MYH3P11055 1940 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
TPM1-202ENST00000288398 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 DLK2Q6UY11 383 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 CDCA5Q96FF9 252 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 ABHD8Q96I13 439 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
TPM1-202ENST00000288398 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
TPM1-202ENST00000288398 SCN9AQ15858 1988 aa17.85■□□□□ 0.45
TPM1-202ENST00000288398 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 VAMP4O75379 141 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 TAF7LQ5H9L4 462 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 STRIP1Q5VSL9 837 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 HDAC9Q9UKV0 1011 aa17.84■□□□□ 0.45
TPM1-202ENST00000288398 ASTN2O75129 1339 aaPredicted RBP17.83■□□□□ 0.44
TPM1-202ENST00000288398 NF2P35240 595 aa17.83■□□□□ 0.44
TPM1-202ENST00000288398 MMP14P50281 582 aa17.83■□□□□ 0.44
TPM1-202ENST00000288398 IFIT5Q13325 482 aaKnown RBP17.83■□□□□ 0.44
TPM1-202ENST00000288398 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
TPM1-202ENST00000288398 FKBP1BP68106 108 aa17.82■□□□□ 0.44
TPM1-202ENST00000288398 TTLL12Q14166 644 aaPredicted RBP17.82■□□□□ 0.44
TPM1-202ENST00000288398 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
TPM1-202ENST00000288398 GMLQ99445 158 aa17.82■□□□□ 0.44
TPM1-202ENST00000288398 CSF1RP07333 972 aa17.81■□□□□ 0.44
TPM1-202ENST00000288398 KIF23Q02241 960 aaPredicted RBP17.81■□□□□ 0.44
TPM1-202ENST00000288398 CHRNDQ07001 517 aa17.81■□□□□ 0.44
TPM1-202ENST00000288398 DACT2Q5SW24 774 aa17.81■□□□□ 0.44
TPM1-202ENST00000288398 C9orf78Q9NZ63 289 aaPredicted RBP17.81■□□□□ 0.44
TPM1-202ENST00000288398 PSME4Q14997 1843 aa17.8■□□□□ 0.44
TPM1-202ENST00000288398 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
TPM1-202ENST00000288398 F6X3S4 739 aa17.8■□□□□ 0.44
TPM1-202ENST00000288398 CASP7P55210 303 aa17.8■□□□□ 0.44
TPM1-202ENST00000288398 CCDC57Q2TAC2 916 aa17.8■□□□□ 0.44
TPM1-202ENST00000288398 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
TPM1-202ENST00000288398 MXD3Q9BW11 206 aa17.8■□□□□ 0.44
TPM1-202ENST00000288398 CACNA1FO60840 1977 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 FAM155AB1AL88 458 aaPredicted RBP17.79■□□□□ 0.44
TPM1-202ENST00000288398 SLC10A3P09131 477 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 GTF2IP78347 998 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 NBPF9Q3BBW0 867 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 SLC4A10Q6U841 1118 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 ZNF804AQ7Z570 1209 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 SAGE1Q9NXZ1 904 aa17.79■□□□□ 0.44
TPM1-202ENST00000288398 POLR2AP24928 1970 aaKnown RBP17.79■□□□□ 0.44
TPM1-202ENST00000288398 GRM8O00222 908 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 DGKZQ13574 1117 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 BEND3Q5T5X7 828 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 TXNRD3Q86VQ6 643 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 KIAA0825Q8IV33 1275 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 CNNM1Q9NRU3 951 aa17.78■□□□□ 0.44
TPM1-202ENST00000288398 WNT10BO00744 389 aa17.77■□□□□ 0.44
TPM1-202ENST00000288398 SASH1O94885 1247 aa17.77■□□□□ 0.44
TPM1-202ENST00000288398 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
TPM1-202ENST00000288398 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.44
TPM1-202ENST00000288398 PAPPA2Q9BXP8 1791 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 PLIN1O60240 522 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 TAF5LO75529 589 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 TRPA1O75762 1119 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 KLRK1P26718 216 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 LDHAL6AQ6ZMR3 332 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 HELBQ8NG08 1087 aaPredicted RBP17.76■□□□□ 0.43
TPM1-202ENST00000288398 SRCIN1Q9C0H9 1055 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 MCOLN1Q9GZU1 580 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 CD209Q9NNX6 404 aa17.76■□□□□ 0.43
TPM1-202ENST00000288398 SCAF8Q9UPN6 1271 aaKnown RBP17.76■□□□□ 0.43
TPM1-202ENST00000288398 MYO1BO43795 1136 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 FOXO4P98177 505 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 DLGAP5Q15398 846 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 ARMC9Q7Z3E5 817 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 RASAL3Q86YV0 1011 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 RNF186Q9NXI6 227 aa17.75■□□□□ 0.43
TPM1-202ENST00000288398 UBE2Q2LH0YL09 131 aa17.74■□□□□ 0.43
TPM1-202ENST00000288398 PRAMEF18Q5VWM3 479 aa17.74■□□□□ 0.43
TPM1-202ENST00000288398 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
TPM1-202ENST00000288398 CSRNP1Q96S65 589 aa17.73■□□□□ 0.43
TPM1-202ENST00000288398 C15orf52Q6ZUT6 534 aaKnown RBP17.72■□□□□ 0.43
TPM1-202ENST00000288398 MOB2Q70IA6 237 aa17.72■□□□□ 0.43
TPM1-202ENST00000288398 F8W031 263 aaPredicted RBP17.71■□□□□ 0.43
TPM1-202ENST00000288398 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
TPM1-202ENST00000288398 PRKG1Q13976 671 aa17.71■□□□□ 0.43
TPM1-202ENST00000288398 ZNF594Q96JF6 807 aaPredicted RBP17.71■□□□□ 0.43
TPM1-202ENST00000288398 CASP8AP2Q9UKL3 1982 aa17.71■□□□□ 0.43
TPM1-202ENST00000288398 SNAP23O00161 211 aa17.7■□□□□ 0.42
TPM1-202ENST00000288398 IL1R1P14778 569 aa17.7■□□□□ 0.42
TPM1-202ENST00000288398 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
TPM1-202ENST00000288398 SREBF2Q12772 1141 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms