RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC12A7Q9Y666 1083 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 PRC1O43663 620 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 SKILP12757 684 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 AMOTL1Q8IY63 956 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 NCOA7Q8NI08 942 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 MTMR6Q9Y217 621 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 CDK12Q9NYV4 1490 aaPredicted RBP14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 LMOD1P29536 600 aaPredicted RBP14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 ATP2B3Q16720 1220 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 C10orf67Q8IYJ2 551 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
SLC6A1-201ENST00000287766 RANBP6O60518 1105 aaKnown RBP14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 IL15P40933 162 aaPredicted RBP14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 ZDHHC9Q9Y397 364 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 AOX1Q06278 1338 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 IARSP41252 1262 aaKnown RBP14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 SMARCC1Q92922 1105 aaPredicted RBP14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 A0A1B0GUL7 405 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 CTAGE5O15320 804 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 GBP3Q9H0R5 595 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 ADAMTS2O95450 1211 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 EPS15P42566 896 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 RSPH14Q9UHP6 348 aa14.47□□□□□ -0.09
SLC6A1-201ENST00000287766 SMTNL1A8MU46 457 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 HOXB7P09629 217 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 NEFHP12036 1026 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 LEO1Q8WVC0 666 aaPredicted RBP14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 NEURL1BA8MQ27 555 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 SNW1Q13573 536 aaKnown RBP14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 MCM6Q14566 821 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 TTC6Q86TZ1 520 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 MAGEC2Q9UBF1 373 aaPredicted RBP14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 IQGAP1P46940 1657 aa14.46□□□□□ -0.09
SLC6A1-201ENST00000287766 ZSCAN12O43309 604 aa14.46□□□□□ -0.1
SLC6A1-201ENST00000287766 MRPS27Q92552 414 aaKnown RBP14.46□□□□□ -0.1
SLC6A1-201ENST00000287766 ALG1Q9BT22 464 aa14.46□□□□□ -0.1
SLC6A1-201ENST00000287766 BABAM1Q9NWV8 329 aa14.46□□□□□ -0.1
SLC6A1-201ENST00000287766 A0A087WWV3 80 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 MAP3K12Q12852 859 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 IQSEC2Q5JU85 1478 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 HSPA2P54652 639 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 DCAF5Q96JK2 942 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 RNF113AO15541 343 aaKnown RBP14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 SRRTQ9BXP5 876 aaKnown RBP14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 GNL3LQ9NVN8 582 aaKnown RBP14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 CUL4AQ13619 759 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 ZNF589Q86UQ0 364 aaPredicted RBP14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 CBX8Q9HC52 389 aa14.45□□□□□ -0.1
SLC6A1-201ENST00000287766 TOP1P11387 765 aaKnown RBP14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 CASQ1P31415 396 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 ALKQ9UM73 1620 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 PI4K2BQ8TCG2 481 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 FAM107BQ9H098 131 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 A2ML1A8K2U0 1454 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 SYKP43405 635 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 ZKSCAN3Q9BRR0 538 aa14.44□□□□□ -0.1
SLC6A1-201ENST00000287766 ARAP3Q8WWN8 1544 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 KIF20AO95235 890 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 ENOX2Q16206 610 aaKnown RBP14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 ZSWIM6Q9HCJ5 1215 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 SSRP1Q08945 709 aaKnown RBP14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 LRMPQ12912 555 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 MYO6Q9UM54 1294 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 RGS12O14924 1447 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 SPTLC2O15270 562 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 KIF5CO60282 957 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 NR1I2O75469 434 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 SLFNL1Q499Z3 407 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 TTLL7Q6ZT98 887 aa14.43□□□□□ -0.1
SLC6A1-201ENST00000287766 GNG11P61952 73 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 ATP2B2Q01814 1243 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 MIGA1Q8NAN2 632 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 ZBTB43O43298 467 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 KIAA1328Q86T90 577 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 TMX4Q9H1E5 349 aaPredicted RBP14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 ACSBG1Q96GR2 724 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 MYL10Q9BUA6 226 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 DNAI1Q9UI46 699 aa14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 DBNLQ9UJU6 430 aaKnown RBP14.42□□□□□ -0.1
SLC6A1-201ENST00000287766 EYA2O00167 538 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 ERLIN2O94905 339 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 TXLNBQ8N3L3 684 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 IL25Q9H293 177 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 IFNKQ9P0W0 207 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms