RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 RAD21O60216 631 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 GYS1P13807 737 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 PTPN12Q05209 780 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 TRIM28Q13263 835 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 R3HDM1Q15032 1099 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 KIF6Q6ZMV9 814 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 GPR108Q9NPR9 543 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 RBM28Q9NW13 759 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 UBR3Q6ZT12 1888 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 MAP4K4O95819 1239 aaPredicted RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 RFC4P35249 363 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 EPHA10Q5JZY3 1008 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 GIGYF2Q6Y7W6 1299 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 SNRKQ9NRH2 765 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 ISY1Q9ULR0 285 aaKnown RBP8.99□□□□□ -0.97
TRIM42-201ENST00000286349 SRCAPQ6ZRS2 3230 aa8.99□□□□□ -0.97
TRIM42-201ENST00000286349 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 ATP5JP18859 108 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 CUL4AQ13619 759 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 TNNI3KQ59H18 835 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 TBC1D9BQ66K14 1250 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 CWC27Q6UX04 472 aaKnown RBP8.98□□□□□ -0.97
TRIM42-201ENST00000286349 ZNF34Q8IZ26 560 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 SIL1Q9H173 461 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 EFCC1Q9HA90 598 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 FPGT-TNNI3KV9GXZ4 949 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 PSDA5PKW4 1024 aaPredicted RBP8.98□□□□□ -0.97
TRIM42-201ENST00000286349 TRAK2O60296 914 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 CIAO1O76071 339 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 HMGB2P26583 209 aaKnown RBP8.98□□□□□ -0.97
TRIM42-201ENST00000286349 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
TRIM42-201ENST00000286349 TCIRG1Q13488 830 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 ISCA1Q9BUE6 129 aa8.98□□□□□ -0.97
TRIM42-201ENST00000286349 GOLGB1Q14789 3259 aaKnown RBP8.98□□□□□ -0.97
TRIM42-201ENST00000286349 ZPR1O75312 459 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 TM4SF1P30408 202 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 FOXO4P98177 505 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 SETDB1Q15047 1291 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 LMBR1LQ6UX01 489 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 FLAD1Q8NFF5 587 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 TMX3Q96JJ7 454 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 TM6SF1Q9BZW5 370 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 CCDC8Q9H0W5 538 aaPredicted RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 CEP83Q9Y592 693 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 UBN2Q6ZU65 1347 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 LOC102724159A0A0B4J2E5 919 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 CYP2E1P05181 493 aaPredicted RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 ZKSCAN1P17029 563 aaPredicted RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 PWP2Q15269 919 aaKnown RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 SPTY2D1Q68D10 685 aaPredicted RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 KCNB2Q92953 911 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 FSD1Q9BTV5 496 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 CCDC94Q9BW85 323 aaPredicted RBP8.97□□□□□ -0.97
TRIM42-201ENST00000286349 PLA2G12BQ9BX93 195 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 FOXD4L1Q9NU39 408 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 PALD1Q9ULE6 856 aa8.97□□□□□ -0.97
TRIM42-201ENST00000286349 ESPNB1AK53 854 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 GPTP24298 496 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 TFCP2Q12800 502 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 NFIXQ14938 502 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 MSL1Q68DK7 614 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 SYNE4Q8N205 404 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 SNX14Q9Y5W7 946 aa8.96□□□□□ -0.97
TRIM42-201ENST00000286349 PCCAP05165 728 aaPredicted RBP8.96□□□□□ -0.98
TRIM42-201ENST00000286349 PSMA5P28066 241 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 SUSD4Q5VX71 490 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 NLRP10Q86W26 655 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 KCTD17Q8N5Z5 321 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
TRIM42-201ENST00000286349 MKL1Q969V6 931 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 CCDC171Q6TFL3 1326 aa8.96□□□□□ -0.98
TRIM42-201ENST00000286349 DDR1Q08345 913 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 MTA1Q13330 715 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 KLHDC4Q8TBB5 520 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 BOLA2Q9H3K6 86 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 HMG20BQ9P0W2 317 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 CHMP3Q9Y3E7 222 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 CDHR2Q9BYE9 1310 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 EYA2O00167 538 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 RGL2O15211 777 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 XRCC6P12956 609 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 CCDC57Q2TAC2 916 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 LRRFIP1Q32MZ4 808 aaKnown RBP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 ZBTB38Q8NAP3 1195 aaPredicted RBP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 MAP4K1Q92918 833 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 ZSCAN31Q96LW9 406 aaPredicted RBP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 HAUS7Q99871 368 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 IL25Q9H293 177 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 TLR7Q9NYK1 1049 aaKnown RBP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 DBNLQ9UJU6 430 aaKnown RBP8.95□□□□□ -0.98
TRIM42-201ENST00000286349 AKAP2Q9Y2D5 859 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 C4AP0C0L4 1744 aa8.95□□□□□ -0.98
TRIM42-201ENST00000286349 ZBTB7AO95365 584 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms