RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RGS3P49796 1198 aa26.78■■□□□ 1.88
PDLIM3-203ENST00000284771 GGA1Q9UJY5 639 aa26.77■■□□□ 1.88
PDLIM3-203ENST00000284771 MX1P20591 662 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 ATP2B4P23634 1241 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 PDE1AP54750 535 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 DPP8Q6V1X1 898 aaPredicted RBP26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 UFL1O94874 794 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 SLC5A1P13866 664 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 KCNJ4P48050 445 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 CC2D2BQ6DHV5 1058 aa26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 TMX4Q9H1E5 349 aaPredicted RBP26.76■■□□□ 1.87
PDLIM3-203ENST00000284771 IFIT1P09914 478 aaKnown RBP26.75■■□□□ 1.87
PDLIM3-203ENST00000284771 STAP2Q9UGK3 403 aa26.75■■□□□ 1.87
PDLIM3-203ENST00000284771 ARAP2Q8WZ64 1704 aa26.75■■□□□ 1.87
PDLIM3-203ENST00000284771 FAM84BQ96KN1 310 aaPredicted RBP26.74■■□□□ 1.87
PDLIM3-203ENST00000284771 C6orf229H3BNL8 230 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 GYG1P46976 350 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 BCAMP50895 628 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 CCDC93Q567U6 631 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 RTFDC1Q9BY42 306 aaPredicted RBP26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 OSBPL3Q9H4L5 887 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 PI4K2BQ8TCG2 481 aa26.73■■□□□ 1.87
PDLIM3-203ENST00000284771 ARFGEF1Q9Y6D6 1849 aa26.72■■□□□ 1.87
PDLIM3-203ENST00000284771 PHKA1P46020 1223 aa26.72■■□□□ 1.87
PDLIM3-203ENST00000284771 CCDC102BQ68D86 513 aa26.72■■□□□ 1.87
PDLIM3-203ENST00000284771 C15orf52Q6ZUT6 534 aaKnown RBP26.72■■□□□ 1.87
PDLIM3-203ENST00000284771 ECHDC1Q9NTX5 307 aa26.72■■□□□ 1.87
PDLIM3-203ENST00000284771 RTKN2Q8IZC4 609 aa26.71■■□□□ 1.87
PDLIM3-203ENST00000284771 FER1L6Q2WGJ9 1857 aa26.7■■□□□ 1.87
PDLIM3-203ENST00000284771 FBXO33Q7Z6M2 555 aa26.7■■□□□ 1.87
PDLIM3-203ENST00000284771 TTC41PQ6P2S7 1318 aa26.7■■□□□ 1.86
PDLIM3-203ENST00000284771 GORABQ5T7V8 394 aa26.7■■□□□ 1.86
PDLIM3-203ENST00000284771 GRIPAP1Q4V328 841 aa26.69■■□□□ 1.86
PDLIM3-203ENST00000284771 SOGA3Q5TF21 947 aa26.69■■□□□ 1.86
PDLIM3-203ENST00000284771 PSMD1Q99460 953 aa26.69■■□□□ 1.86
PDLIM3-203ENST00000284771 MED23Q9ULK4 1368 aa26.68■■□□□ 1.86
PDLIM3-203ENST00000284771 RIMBP2O15034 1052 aa26.68■■□□□ 1.86
PDLIM3-203ENST00000284771 SCARF1Q14162 830 aa26.68■■□□□ 1.86
PDLIM3-203ENST00000284771 CCDC158Q5M9N0 1113 aa26.68■■□□□ 1.86
PDLIM3-203ENST00000284771 YBX3P16989 372 aaKnown RBP eCLIP26.67■■□□□ 1.86
PDLIM3-203ENST00000284771 ATP5JP18859 108 aa26.67■■□□□ 1.86
PDLIM3-203ENST00000284771 WASHC4Q2M389 1173 aa26.67■■□□□ 1.86
PDLIM3-203ENST00000284771 NFKBIEO00221 500 aa26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 CAVIN4Q5BKX8 364 aa26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 NDUFB9Q9Y6M9 179 aa26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 HIBADHP31937 336 aaKnown RBP26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 FKBP4Q02790 459 aaKnown RBP eCLIP26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 ZNF512BQ96KM6 892 aaPredicted RBP26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 ZC3H12CQ9C0D7 883 aaKnown RBP26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 BOLA2Q9H3K6 86 aa26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 IQSEC3Q9UPP2 1182 aaPredicted RBP26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 AKAP11Q9UKA4 1901 aa26.66■■□□□ 1.86
PDLIM3-203ENST00000284771 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 ARID4AP29374 1257 aaPredicted RBP26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 MCAMP43121 646 aa26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 TTC39AQ5SRH9 613 aa26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 PI16Q6UXB8 463 aa26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 GPATCH3Q96I76 525 aa26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 AOX1Q06278 1338 aa26.65■■□□□ 1.86
PDLIM3-203ENST00000284771 ZNF277Q9NRM2 450 aaPredicted RBP26.64■■□□□ 1.86
PDLIM3-203ENST00000284771 GLRX3O76003 335 aaKnown RBP26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 AOC3Q16853 763 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 TTC22Q5TAA0 569 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 VPS37DQ86XT2 251 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 EYA3Q99504 573 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 CHD4Q14839 1912 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 PRELPP51888 382 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 KIAA2012Q0VF49 1180 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 RASGRF1Q13972 1273 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 CD209Q9NNX6 404 aa26.63■■□□□ 1.85
PDLIM3-203ENST00000284771 ERC2O15083 957 aa26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 MAP4K4O95819 1239 aaPredicted RBP26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 DOK7Q18PE1 504 aa26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 SUPT20HQ8NEM7 779 aa26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 TAOK3Q9H2K8 898 aa26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 SNRKQ9NRH2 765 aa26.62■■□□□ 1.85
PDLIM3-203ENST00000284771 ZNF804AQ7Z570 1209 aa26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 TDRD7Q8NHU6 1098 aaKnown RBP26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 EDC3Q96F86 508 aaKnown RBP26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 HMG20BQ9P0W2 317 aa26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 COL1A1P02452 1464 aaPredicted RBP26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 COL4A5P29400 1685 aa26.61■■□□□ 1.85
PDLIM3-203ENST00000284771 UQCRFS1P1P0C7P4 283 aa26.6■■□□□ 1.85
PDLIM3-203ENST00000284771 IL1R1P14778 569 aa26.6■■□□□ 1.85
PDLIM3-203ENST00000284771 RASSF7Q02833 373 aa26.6■■□□□ 1.85
PDLIM3-203ENST00000284771 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
PDLIM3-203ENST00000284771 HAUS7Q99871 368 aa26.6■■□□□ 1.85
PDLIM3-203ENST00000284771 LTBP3Q9NS15 1303 aa26.59■■□□□ 1.85
PDLIM3-203ENST00000284771 PPIP5K2O43314 1243 aa26.59■■□□□ 1.85
PDLIM3-203ENST00000284771 COA1Q9GZY4 146 aa26.59■■□□□ 1.85
PDLIM3-203ENST00000284771 DBNDD1Q9H9R9 158 aa26.59■■□□□ 1.85
PDLIM3-203ENST00000284771 ZAP70P43403 619 aa26.58■■□□□ 1.85
PDLIM3-203ENST00000284771 SPATA5Q8NB90 893 aa26.58■■□□□ 1.85
PDLIM3-203ENST00000284771 DNAJC2Q99543 621 aaKnown RBP26.58■■□□□ 1.85
PDLIM3-203ENST00000284771 ANTXR1Q9H6X2 564 aa26.58■■□□□ 1.85
PDLIM3-203ENST00000284771 GNL3LQ9NVN8 582 aaKnown RBP26.58■■□□□ 1.85
PDLIM3-203ENST00000284771 ZBTB22O15209 634 aa26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 IARSP41252 1262 aaKnown RBP26.57■■□□□ 1.84
PDLIM3-203ENST00000284771 BMP2KLQ5H9B9 411 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms