RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 TRIM27P14373 513 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 PAX7P23759 505 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 BEND3Q5T5X7 828 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 TAF4BQ92750 862 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 PLA2G12BQ9BX93 195 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 SMC3Q9UQE7 1217 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 CAND2O75155 1236 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 CAMTA2O94983 1202 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 SDR16C5Q8N3Y7 309 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
PDCD4-201ENST00000280154 ALDH1L1O75891 902 aa11.27□□□□□ -0.6
PDCD4-201ENST00000280154 PROSER3Q2NL68 480 aa11.27□□□□□ -0.6
PDCD4-201ENST00000280154 ZNF34Q8IZ26 560 aa11.27□□□□□ -0.6
PDCD4-201ENST00000280154 DHX38Q92620 1227 aaKnown RBP11.27□□□□□ -0.6
PDCD4-201ENST00000280154 MRGBPQ9NV56 204 aa11.27□□□□□ -0.6
PDCD4-201ENST00000280154 CHPF2Q9P2E5 772 aa11.27□□□□□ -0.6
PDCD4-201ENST00000280154 MAP3K15Q6ZN16 1313 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 SEMA3EO15041 775 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 STARD3NLO95772 234 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 CRKLP46109 303 aaKnown RBP11.27□□□□□ -0.61
PDCD4-201ENST00000280154 MTX1Q13505 466 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 DNAJC10Q8IXB1 793 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
PDCD4-201ENST00000280154 CDHR2Q9BYE9 1310 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 BCAR3O75815 825 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 FLIIQ13045 1269 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 KSR2Q6VAB6 950 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 WDR75Q8IWA0 830 aaKnown RBP11.27□□□□□ -0.61
PDCD4-201ENST00000280154 AK7Q96M32 723 aa11.27□□□□□ -0.61
PDCD4-201ENST00000280154 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 FMNL3Q8IVF7 1028 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 A0A087WZG4 1122 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 ZNF771Q7L3S4 317 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-201ENST00000280154 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
PDCD4-201ENST00000280154 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 COL4A1P02462 1669 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 KLRG2A4D1S0 409 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-201ENST00000280154 TPM3P06753 285 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 DMTNQ08495 405 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 G2E3Q7L622 706 aa11.26□□□□□ -0.61
PDCD4-201ENST00000280154 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-201ENST00000280154 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 GTF2A1P52655 376 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 TXNRD1Q16881 649 aa11.25□□□□□ -0.61
PDCD4-201ENST00000280154 NYAP1Q6ZVC0 841 aa11.25□□□□□ -0.61
PDCD4-201ENST00000280154 METTL22Q9BUU2 404 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 CSPG5O95196 566 aa11.25□□□□□ -0.61
PDCD4-201ENST00000280154 PHC3Q8NDX5 983 aa11.25□□□□□ -0.61
PDCD4-201ENST00000280154 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
PDCD4-201ENST00000280154 ZCCHC8Q6NZY4 707 aaKnown RBP11.24□□□□□ -0.61
PDCD4-201ENST00000280154 ZBTB40Q9NUA8 1239 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 IP6K2Q9UHH9 426 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 SPEF2Q9C093 1822 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 RLBP1P12271 317 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 CAPN2P17655 700 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
PDCD4-201ENST00000280154 NARFQ9UHQ1 456 aa11.24□□□□□ -0.61
PDCD4-201ENST00000280154 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
PDCD4-201ENST00000280154 MVPQ14764 893 aaKnown RBP11.24□□□□□ -0.61
PDCD4-201ENST00000280154 C10orf71Q711Q0 1435 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 hCG_2014768A0A024R1R8 64 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 IGHDP01880 384 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 TM4SF1P30408 202 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
PDCD4-201ENST00000280154 GIGYF2Q6Y7W6 1299 aaKnown RBP11.23□□□□□ -0.61
PDCD4-201ENST00000280154 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 SLC10A5Q5PT55 438 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 ANKRD23Q86SG2 305 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 RABL2AQ9UBK7 228 aaPredicted RBP11.23□□□□□ -0.61
PDCD4-201ENST00000280154 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 TRIM37O94972 964 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
PDCD4-201ENST00000280154 DPH6Q7L8W6 267 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 PNPLA7Q6ZV29 1317 aa11.23□□□□□ -0.61
PDCD4-201ENST00000280154 H7C1W4 665 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 FKBP15Q5T1M5 1219 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 ZNF827Q17R98 1081 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
PDCD4-201ENST00000280154 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms