RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 STK38Q15208 465 aa10.58□□□□□ -0.72
SEC16A-201ENST00000277537 PUM3Q15397 648 aaKnown RBP10.58□□□□□ -0.72
SEC16A-201ENST00000277537 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
SEC16A-201ENST00000277537 NFAT5O94916 1531 aa10.58□□□□□ -0.72
SEC16A-201ENST00000277537 RANBP6O60518 1105 aaKnown RBP10.57□□□□□ -0.72
SEC16A-201ENST00000277537 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 SUSD4Q5VX71 490 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 DHX32Q7L7V1 743 aaKnown RBP10.57□□□□□ -0.72
SEC16A-201ENST00000277537 F13A1P00488 732 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 ZSCAN23Q3MJ62 389 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 RPGRQ92834 1020 aaKnown RBP10.57□□□□□ -0.72
SEC16A-201ENST00000277537 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 BECN2A8MW95 431 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
SEC16A-201ENST00000277537 MCM5P33992 734 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 SAFBQ15424 915 aaKnown RBP eCLIP10.57□□□□□ -0.72
SEC16A-201ENST00000277537 SASS6Q6UVJ0 657 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 OVOS2A0A0G2JMS6 1433 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 NCOA3Q9Y6Q9 1424 aa10.57□□□□□ -0.72
SEC16A-201ENST00000277537 PRC1O43663 620 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 MBD4O95243 580 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 LARGE1O95461 756 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 BCAMP50895 628 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 MARCH10Q8NA82 808 aaPredicted RBP10.56□□□□□ -0.72
SEC16A-201ENST00000277537 CHD2O14647 1828 aaKnown RBP10.56□□□□□ -0.72
SEC16A-201ENST00000277537 JAK2O60674 1132 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 DZIP1Q86YF9 867 aaKnown RBP10.56□□□□□ -0.72
SEC16A-201ENST00000277537 RASSF8Q8NHQ8 419 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 LPIN2Q92539 896 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 ISCA1Q9BUE6 129 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 C6orf229H3BNL8 230 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 PDE8BO95263 885 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 CYP21A2P08686 494 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 HSPD1P10809 573 aaKnown RBP10.56□□□□□ -0.72
SEC16A-201ENST00000277537 TMEM67Q5HYA8 995 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 APPBP2Q92624 585 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 C8orf76Q96K31 380 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 ARMT1Q9H993 441 aa10.56□□□□□ -0.72
SEC16A-201ENST00000277537 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
SEC16A-201ENST00000277537 PALLDQ8WX93 1383 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 KIAA2012Q0VF49 1180 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 NKX1-1Q15270 411 aaPredicted RBP10.55□□□□□ -0.72
SEC16A-201ENST00000277537 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 CKAP2LQ8IYA6 745 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 ZSWIM6Q9HCJ5 1215 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
SEC16A-201ENST00000277537 NSFL1CQ9UNZ2 370 aaKnown RBP10.55□□□□□ -0.72
SEC16A-201ENST00000277537 ZNF532Q9HCE3 1301 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 GOLGA6L19H0YKK7 550 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 GYG1P46976 350 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 RABL6Q3YEC7 729 aaPredicted RBP10.55□□□□□ -0.72
SEC16A-201ENST00000277537 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
SEC16A-201ENST00000277537 MFSD6Q6ZSS7 791 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 CREBRFQ8IUR6 639 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
SEC16A-201ENST00000277537 KINO60870 393 aaKnown RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 NECTIN1Q15223 517 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 SLC12A7Q9Y666 1083 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 PXDNLA1KZ92 1463 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 COL5A2P05997 1499 aaPredicted RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 B4E1Z4 1266 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 GADD45BO75293 160 aaPredicted RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 BRD1O95696 1058 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 RFX5P48382 616 aaPredicted RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 GIMAP6Q6P9H5 292 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 SPATA5Q8NB90 893 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 OSBP2Q969R2 916 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 CFAP45Q9UL16 551 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 TOPAZ1Q8N9V7 1692 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 SALL3Q9BXA9 1300 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 LTN1O94822 1766 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 E7EWF7 191 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 HMGN5P82970 282 aaKnown RBP10.54□□□□□ -0.72
SEC16A-201ENST00000277537 FAM43AQ8N2R8 423 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 ADAMTSL3P82987 1691 aa10.54□□□□□ -0.72
SEC16A-201ENST00000277537 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 CIAO1O76071 339 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 FGAP02671 866 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 USP5P45974 858 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 SCARF1Q14162 830 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 TM6SF1Q9BZW5 370 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 METAP2P50579 478 aaKnown RBP eCLIP10.53□□□□□ -0.72
SEC16A-201ENST00000277537 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 NAA16Q6N069 864 aaPredicted RBP10.53□□□□□ -0.72
SEC16A-201ENST00000277537 SCAND2PQ9GZW5 306 aaPredicted RBP10.53□□□□□ -0.72
SEC16A-201ENST00000277537 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms