RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 INTS4Q96HW7 963 aaKnown RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 UTP14AQ9BVJ6 771 aaKnown RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 TTF2Q9UNY4 1162 aaKnown RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 RHOXF2BP0C7M4 288 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 GSTO1P78417 241 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 BRAPQ7Z569 592 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 IFT81Q8WYA0 676 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 RHOXF2Q9BQY4 288 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CABP5Q9NP86 173 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CCDC61Q9Y6R9 512 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 HMGB1P1B2RPK0 211 aaPredicted RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 PTGS1P23219 599 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 MRVI1Q9Y6F6 885 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 TRIM75PA6NK02 468 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CALM1P0DP23 149 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CALM2P0DP24 149 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 CALM3P0DP25 149 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 ESYT1Q9BSJ8 1104 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 ATP6V0A2Q9Y487 856 aa9.84□□□□□ -0.83
SCUBE3-201ENST00000274938 NDUFAB1O14561 156 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 HLA-DOAP06340 250 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 PPP1R7Q15435 360 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 RTN1Q16799 776 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CAPZA3Q96KX2 299 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CRNKL1Q9BZJ0 848 aaKnown RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CFTRP13569 1480 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 TMOD3Q9NYL9 352 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 BUB1BO60566 1050 aaPredicted RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 VWA3BQ502W6 1294 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CEP85LQ5SZL2 805 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 ESR2Q92731 530 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 FAM169AQ9Y6X4 670 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 TLDC2A0PJX2 215 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 PHACTR2O75167 634 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 ARL1P40616 181 aaPredicted RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 UBXN1Q04323 297 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 PHLDB2Q86SQ0 1253 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CLUL1Q15846 466 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 TEX13AQ9BXU3 409 aaPredicted RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
SCUBE3-201ENST00000274938 CALML3P27482 149 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 MRPS9P82933 396 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 FAM69CQ0P6D2 419 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 RUFY4Q6ZNE9 571 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 BICDL1Q6ZP65 573 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 NAPGQ99747 312 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 ANKIB1Q9P2G1 1089 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 VGLL3A8MV65 326 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 AKR1B15C9JRZ8 316 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 EEF2P13639 858 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 NUDT16Q96DE0 195 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 BAG1Q99933 345 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 F6X3S4 739 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 PLCB3Q01970 1234 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 KARSQ15046 597 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 NUTM2AQ8IVF1 878 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 RHPN1Q8TCX5 695 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 UBLCP1Q8WVY7 318 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 CDC5LQ99459 802 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 LZTFL1Q9NQ48 299 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 RTL9Q8NET4 1388 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 LMOD1P29536 600 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 PPM1FP49593 454 aaPredicted RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 VIMP08670 466 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 ZNF853P0CG23 659 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 SDSP20132 328 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 MYL5Q02045 173 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 CCDC38Q502W7 563 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 IFNKQ9P0W0 207 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 SAMM50Q9Y512 469 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 NAP1L4Q99733 375 aaKnown RBP9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 MIS18AQ9NYP9 233 aa9.82□□□□□ -0.84
SCUBE3-201ENST00000274938 DNM1Q05193 864 aaKnown RBP9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 ZPR1O75312 459 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 PPFIA4O75335 1185 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 SNX16P57768 344 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 CCDC122Q5T0U0 273 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 NECAB1Q8N987 351 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 PSMD1Q99460 953 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 RBM8AQ9Y5S9 174 aaKnown RBP9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 GOLGA6CA6NDK9 693 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 GOLGA6DP0CG33 693 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 KRT79Q5XKE5 535 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 GTF3C6Q969F1 213 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms