RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 POTEBQ6S5H4 581 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 TMC4Q7Z404 712 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 ZBTB38Q8NAP3 1195 aaPredicted RBP11.64□□□□□ -0.55
TPM3-201ENST00000271850 TBC1D16Q8TBP0 767 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
TPM3-201ENST00000271850 NSFL1CQ9UNZ2 370 aaKnown RBP11.64□□□□□ -0.55
TPM3-201ENST00000271850 ZNF646O15015 1829 aaPredicted RBP11.64□□□□□ -0.55
TPM3-201ENST00000271850 ECE2O60344 883 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
TPM3-201ENST00000271850 GRM1Q13255 1194 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 TNIP1Q15025 636 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 WASHC4Q2M389 1173 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 ZC3H15Q8WU90 426 aaKnown RBP11.63□□□□□ -0.55
TPM3-201ENST00000271850 MYD88Q99836 296 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
TPM3-201ENST00000271850 POLR2AP24928 1970 aaKnown RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 IGKV5-2P06315 115 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 RPS8P62241 208 aaKnown RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 TBC1D10BQ4KMP7 808 aaPredicted RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 PAXIP1Q6ZW49 1069 aaPredicted RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 USP48Q86UV5 1035 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 ZNF710Q8N1W2 664 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 DPF2Q92785 391 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
TPM3-201ENST00000271850 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 BOLA1Q9Y3E2 137 aa11.62□□□□□ -0.55
TPM3-201ENST00000271850 PSME4Q14997 1843 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 ADM5C9JUS6 153 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
TPM3-201ENST00000271850 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 TSR2Q969E8 191 aaKnown RBP11.61□□□□□ -0.55
TPM3-201ENST00000271850 ABHD8Q96I13 439 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 HHIPL1Q96JK4 782 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 ZNF408Q9H9D4 720 aa11.61□□□□□ -0.55
TPM3-201ENST00000271850 ZNF609O15014 1411 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 FAM155AB1AL88 458 aaPredicted RBP11.6□□□□□ -0.55
TPM3-201ENST00000271850 VIL1P09327 827 aaKnown RBP11.6□□□□□ -0.55
TPM3-201ENST00000271850 ECE1P42892 770 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 GNAI1P63096 354 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 CDC37L1Q7L3B6 337 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 G2E3Q7L622 706 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
TPM3-201ENST00000271850 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
TPM3-201ENST00000271850 H7C1D1 291 aa11.59□□□□□ -0.55
TPM3-201ENST00000271850 UFL1O94874 794 aa11.59□□□□□ -0.55
TPM3-201ENST00000271850 MAP2K2P36507 400 aa11.59□□□□□ -0.55
TPM3-201ENST00000271850 GMLQ99445 158 aa11.59□□□□□ -0.55
TPM3-201ENST00000271850 PDE8AO60658 829 aa11.58□□□□□ -0.56
TPM3-201ENST00000271850 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.56
TPM3-201ENST00000271850 RBM26Q5T8P6 1007 aaKnown RBP11.58□□□□□ -0.56
TPM3-201ENST00000271850 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.56
TPM3-201ENST00000271850 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
TPM3-201ENST00000271850 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
TPM3-201ENST00000271850 CASP8AP2Q9UKL3 1982 aa11.58□□□□□ -0.56
TPM3-201ENST00000271850 PI4KAP2A4QPH2 592 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
TPM3-201ENST00000271850 CASP7P55210 303 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 HUNKP57058 714 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 ZNF280AP59817 542 aaPredicted RBP11.57□□□□□ -0.56
TPM3-201ENST00000271850 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
TPM3-201ENST00000271850 KIF4BQ2VIQ3 1234 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 PI4KAP1Q8N8J0 262 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 TTLL11Q8NHH1 800 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 EYA3Q99504 573 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 GREM2Q9H772 168 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 GGA3Q9NZ52 723 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 GGA1Q9UJY5 639 aa11.57□□□□□ -0.56
TPM3-201ENST00000271850 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
TPM3-201ENST00000271850 KLRK1P26718 216 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 CTSWP56202 376 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 CCDC152Q4G0S7 254 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
TPM3-201ENST00000271850 KSR2Q6VAB6 950 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 TXNRD3Q86VQ6 643 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 MXD3Q9BW11 206 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 GBA2Q9HCG7 927 aaPredicted RBP11.56□□□□□ -0.56
TPM3-201ENST00000271850 MYH3P11055 1940 aa11.56□□□□□ -0.56
TPM3-201ENST00000271850 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 HOXB3P14651 431 aaPredicted RBP11.55□□□□□ -0.56
TPM3-201ENST00000271850 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
TPM3-201ENST00000271850 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
TPM3-201ENST00000271850 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 XDHP47989 1333 aa11.55□□□□□ -0.56
TPM3-201ENST00000271850 H7C1W4 665 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 CALD1Q05682 793 aaKnown RBP11.54□□□□□ -0.56
TPM3-201ENST00000271850 SCARF1Q14162 830 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 ANGEL2Q5VTE6 544 aaKnown RBP11.54□□□□□ -0.56
TPM3-201ENST00000271850 RGMBQ6NW40 437 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 CDCA5Q96FF9 252 aa11.54□□□□□ -0.56
TPM3-201ENST00000271850 MCOLN1Q9GZU1 580 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms