RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SPATS2Q86XZ4 545 aaKnown RBP14.97□□□□□ -0.01
PRDM16-201ENST00000270722 HACE1Q8IYU2 909 aa14.97□□□□□ -0.01
PRDM16-201ENST00000270722 CYLC1P35663 651 aaPredicted RBP14.96□□□□□ -0.01
PRDM16-201ENST00000270722 TBC1D31Q96DN5 1066 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 ZSCAN16Q9H4T2 348 aaPredicted RBP14.96□□□□□ -0.01
PRDM16-201ENST00000270722 GFAPP14136 432 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 ERCC6LQ2NKX8 1250 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 NUDT16Q96DE0 195 aaKnown RBP14.96□□□□□ -0.01
PRDM16-201ENST00000270722 GIPC1O14908 333 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 GNAT2P19087 354 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 CCDC102BQ68D86 513 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 NCOA7Q8NI08 942 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 TSPY3P0CV98 308 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 TSPY8P0CW00 308 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 SKILP12757 684 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 STX1AQ16623 288 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.01
PRDM16-201ENST00000270722 HSF2BPO75031 334 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 CAPN2P17655 700 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 TMEM67Q5HYA8 995 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 KIAA1107Q9UPP5 1409 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 PCK1P35558 622 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 RAB3IPQ96QF0 476 aaPredicted RBP14.95□□□□□ -0.02
PRDM16-201ENST00000270722 ERCC3P19447 782 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 AKR1B10O60218 316 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 LDHAL6AQ6ZMR3 332 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
PRDM16-201ENST00000270722 GPHNQ9NQX3 736 aaPredicted RBP14.95□□□□□ -0.02
PRDM16-201ENST00000270722 STX8Q9UNK0 236 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 PDE1CQ14123 709 aaPredicted RBP14.95□□□□□ -0.02
PRDM16-201ENST00000270722 CCDC89Q8N998 374 aa14.95□□□□□ -0.02
PRDM16-201ENST00000270722 NUCB1Q02818 461 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 NSD2O96028 1365 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 GSDMBQ8TAX9 411 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 SRRTQ9BXP5 876 aaKnown RBP14.94□□□□□ -0.02
PRDM16-201ENST00000270722 PSMA7O14818 248 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 PPP1R2P41236 205 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 TRIM63Q969Q1 353 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 MGEA5O60502 916 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 ADAMTS2O95450 1211 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 GNA11P29992 359 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 MRFAP1L1Q96HT8 127 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 SMARCC2Q8TAQ2 1214 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 CCT6BQ92526 530 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 SLC5A4Q9NY91 659 aa14.94□□□□□ -0.02
PRDM16-201ENST00000270722 STMN2Q93045 179 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.93□□□□□ -0.02
PRDM16-201ENST00000270722 STK10O94804 968 aaKnown RBP14.93□□□□□ -0.02
PRDM16-201ENST00000270722 SLC8A1P32418 973 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 ZBTB16Q05516 673 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 HAUS7Q99871 368 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 RTEL1Q9NZ71 1219 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
PRDM16-201ENST00000270722 CCDC125Q86Z20 511 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.93□□□□□ -0.02
PRDM16-201ENST00000270722 LRRC9Q6ZRR7 1453 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 BICDL2A1A5D9 508 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 PDE6BP35913 854 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 PSMC4P43686 418 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 SRGAP1Q7Z6B7 1085 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 GBP5Q96PP8 586 aa14.93□□□□□ -0.02
PRDM16-201ENST00000270722 PHF8Q9UPP1 1060 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 FAM169AQ9Y6X4 670 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRDM16-201ENST00000270722 NOX5Q96PH1 765 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 ZC3H12CQ9C0D7 883 aaKnown RBP14.92□□□□□ -0.02
PRDM16-201ENST00000270722 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 TACO1Q9BSH4 297 aaKnown RBP14.92□□□□□ -0.02
PRDM16-201ENST00000270722 SPC25Q9HBM1 224 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 CCDC144CPQ8IYA2 1237 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 IVNS1ABPQ9Y6Y0 642 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 SETDB1Q15047 1291 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 C1orf115Q9H7X2 142 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 VCX3AQ9NNX9 186 aa14.92□□□□□ -0.02
PRDM16-201ENST00000270722 CAPZA3Q96KX2 299 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
PRDM16-201ENST00000270722 KMT5BQ4FZB7 885 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
PRDM16-201ENST00000270722 JADE2Q9NQC1 790 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 HS1BP3Q53T59 392 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 MXRA7P84157 204 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 LCA5Q86VQ0 697 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 BCAR3O75815 825 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 MYD88Q99836 296 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 SNRPA1P09661 255 aaKnown RBP14.91□□□□□ -0.02
PRDM16-201ENST00000270722 SMTNP53814 917 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 INF2Q27J81 1249 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 ARMC9Q7Z3E5 817 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 SLC12A5Q9H2X9 1139 aa14.91□□□□□ -0.02
PRDM16-201ENST00000270722 WTAPQ15007 396 aa14.9□□□□□ -0.02
PRDM16-201ENST00000270722 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
PRDM16-201ENST00000270722 GIMAP4Q9NUV9 329 aa14.9□□□□□ -0.02
PRDM16-201ENST00000270722 MAK16Q9BXY0 300 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms