RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
VPS33A-201ENST00000267199 TIMM10P62072 90 aa13.27□□□□□ -0.29
VPS33A-201ENST00000267199 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
VPS33A-201ENST00000267199 DBNDD2Q9BQY9 259 aa13.27□□□□□ -0.29
VPS33A-201ENST00000267199 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
VPS33A-201ENST00000267199 LTKP29376 864 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-201ENST00000267199 UNC5CLQ8IV45 518 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 NDUFB9Q9Y6M9 179 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 TET3O43151 1660 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 RHOXF2BP0C7M4 288 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 MAP3K4Q9Y6R4 1608 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-201ENST00000267199 SLC5A1P13866 664 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 RPS6KB1P23443 525 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 ATP2B3Q16720 1220 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 ZFYVE27Q5T4F4 411 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 CDC37L1Q7L3B6 337 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-201ENST00000267199 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
VPS33A-201ENST00000267199 CARD6Q9BX69 1037 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 NEO1Q92859 1461 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 ZCCHC11Q5TAX3 1644 aaKnown RBP13.25□□□□□ -0.29
VPS33A-201ENST00000267199 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 SPA17Q15506 151 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 KCNG4Q8TDN1 519 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 PRC1O43663 620 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 N4BP3O15049 544 aa13.25□□□□□ -0.29
VPS33A-201ENST00000267199 CTAGE15A4D2H0 777 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 SPTLC2O15270 562 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 CTAGE8P0CG41 777 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 CTAGE6Q86UF2 777 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 CTAGE4Q8IX94 777 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 EDC3Q96F86 508 aaKnown RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 YEATS4O95619 227 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 AFMP43652 599 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 LUC7LQ9NQ29 371 aaKnown RBP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 DMTNQ08495 405 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 SLC9C2Q5TAH2 1124 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 RASSF4Q9H2L5 321 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 BCCIPQ9P287 314 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS33A-201ENST00000267199 MLH3Q9UHC1 1453 aa13.24□□□□□ -0.29
VPS33A-201ENST00000267199 ZBTB43O43298 467 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 PTH1RQ03431 593 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 IQCA1Q86XH1 822 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 SIRT1Q96EB6 747 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 OSBPL3Q9H4L5 887 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 ERCC6LQ2NKX8 1250 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 LEO1Q8WVC0 666 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 CDC42BPBQ9Y5S2 1711 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 RNF113AO15541 343 aaKnown RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 MFSD6Q6ZSS7 791 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 MADDQ8WXG6 1647 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 STX17P56962 302 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 IKQ13123 557 aaPredicted RBP13.23□□□□□ -0.29
VPS33A-201ENST00000267199 ME3Q16798 604 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
VPS33A-201ENST00000267199 ATP2C2O75185 946 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
VPS33A-201ENST00000267199 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 ERLIN2O94905 339 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
VPS33A-201ENST00000267199 NCOA5Q9HCD5 579 aaKnown RBP13.22□□□□□ -0.29
VPS33A-201ENST00000267199 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 IVLP07476 585 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 ATP7BP35670 1465 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 PAFAH1B1P43034 410 aa13.22□□□□□ -0.29
VPS33A-201ENST00000267199 PPP2R3AQ06190 1150 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms