RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
BEST3-201ENST00000266661 STK3Q13188 491 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 KRT27Q7Z3Y8 459 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 KIAA1524Q8TCG1 905 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 BRF1Q92994 677 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 SPATA32Q96LK8 384 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 DSCC1Q9BVC3 393 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 HELLSQ9NRZ9 838 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 UBR2Q8IWV8 1755 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 CTDNEP1O95476 244 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 CABP4P57796 275 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 SCRN1Q12765 414 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 ZMYM1Q5SVZ6 1142 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 DDX46Q7L014 1031 aaKnown RBP14.71□□□□□ -0.05
BEST3-201ENST00000266661 MYRIPQ8NFW9 859 aa14.71□□□□□ -0.05
BEST3-201ENST00000266661 ZCRB1Q8TBF4 217 aaKnown RBP14.71□□□□□ -0.05
BEST3-201ENST00000266661 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
BEST3-201ENST00000266661 SBF2Q86WG5 1849 aa14.7□□□□□ -0.06
BEST3-201ENST00000266661 KCPQ6ZWJ8 1503 aa14.7□□□□□ -0.06
BEST3-201ENST00000266661 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.06
BEST3-201ENST00000266661 PTF1AQ7RTS3 328 aa14.7□□□□□ -0.06
BEST3-201ENST00000266661 NSUN7Q8NE18 718 aaKnown RBP14.7□□□□□ -0.06
BEST3-201ENST00000266661 TPM3P06753 285 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 HMGB1P09429 215 aaKnown RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 PRIMPOLQ96LW4 560 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 CBX8Q9HC52 389 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 LAMA4Q16363 1823 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 SALL1Q9NSC2 1324 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 PAPPAQ13219 1627 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 RBM10P98175 930 aaKnown RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 CAMK4Q16566 473 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 NAA16Q6N069 864 aaPredicted RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 TTLL7Q6ZT98 887 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 C17orf53Q8N3J3 647 aaPredicted RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 TDRD7Q8NHU6 1098 aaKnown RBP14.69□□□□□ -0.06
BEST3-201ENST00000266661 MAP7D2Q96T17 732 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 PYCARDQ9ULZ3 195 aa14.69□□□□□ -0.06
BEST3-201ENST00000266661 NR1I2O75469 434 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 IL15P40933 162 aaPredicted RBP14.68□□□□□ -0.06
BEST3-201ENST00000266661 HMGN5P82970 282 aaKnown RBP14.68□□□□□ -0.06
BEST3-201ENST00000266661 SLFNL1Q499Z3 407 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 TNS2Q63HR2 1409 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.68□□□□□ -0.06
BEST3-201ENST00000266661 TNMDQ9H2S6 317 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 RCOR1Q9UKL0 485 aa14.68□□□□□ -0.06
BEST3-201ENST00000266661 SPEF2Q9C093 1822 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 CIAO1O76071 339 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
BEST3-201ENST00000266661 LUZP1Q86V48 1076 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 PLA2G4DQ86XP0 818 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 ACSBG1Q96GR2 724 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 CDCA7Q9BWT1 371 aaPredicted RBP14.67□□□□□ -0.06
BEST3-201ENST00000266661 CWC25Q9NXE8 425 aaPredicted RBP14.67□□□□□ -0.06
BEST3-201ENST00000266661 EYA2O00167 538 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 EVCP57679 992 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 TIMM10P62072 90 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 ANO6Q4KMQ2 910 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 CCDC191Q8NCU4 936 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
BEST3-201ENST00000266661 A0A0G2JLW4 131 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 ERVV-2B6SEH9 535 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 GOLIM4O00461 696 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 KCNQ2O43526 872 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 HSPD1P10809 573 aaKnown RBP14.66□□□□□ -0.06
BEST3-201ENST00000266661 LRRC24Q50LG9 513 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 DDX11Q96FC9 970 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 LRRC2Q9BYS8 371 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 MAST3O60307 1309 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 DOT1LQ8TEK3 1739 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 TOGARAM1Q9Y4F4 1720 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 ITGB4P16144 1822 aa14.66□□□□□ -0.06
BEST3-201ENST00000266661 FOXP2O15409 715 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 FAM13BQ9NYF5 915 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 CFAP45Q9UL16 551 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 E7EWF7 191 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
BEST3-201ENST00000266661 A1BGP04217 495 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 GLIPR1L2Q4G1C9 344 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 ZNF274Q96GC6 653 aaPredicted RBP14.65□□□□□ -0.06
BEST3-201ENST00000266661 ISCA1Q9BUE6 129 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 MYH15Q9Y2K3 1946 aa14.65□□□□□ -0.06
BEST3-201ENST00000266661 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 GOLGA6L4A6NEF3 574 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 TRIM37O94972 964 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 ZNF75DP51815 510 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 APOBRQ0VD83 1088 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 ATL3Q6DD88 541 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
BEST3-201ENST00000266661 CAVIN2O95810 425 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 HSP90B1P14625 803 aaKnown RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 PDIA3P30101 505 aaKnown RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 SNW1Q13573 536 aaKnown RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 IQCB1Q15051 598 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms