RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ARHGAP27Q6ZUM4 889 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 EAF2Q96CJ1 260 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-201ENST00000265304 FAM84BQ96KN1 310 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-201ENST00000265304 LRRCC1Q9C099 1032 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 PPP4R2Q9NY27 417 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 FPGT-TNNI3KV9GXZ4 949 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 ZNF609O15014 1411 aa17.61■□□□□ 0.41
SSBP1-201ENST00000265304 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-201ENST00000265304 LMNB1P20700 586 aa17.6■□□□□ 0.41
SSBP1-201ENST00000265304 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
SSBP1-201ENST00000265304 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
SSBP1-201ENST00000265304 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
SSBP1-201ENST00000265304 COL4A5P29400 1685 aa17.6■□□□□ 0.41
SSBP1-201ENST00000265304 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
SSBP1-201ENST00000265304 C6orf229H3BNL8 230 aa17.59■□□□□ 0.41
SSBP1-201ENST00000265304 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
SSBP1-201ENST00000265304 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
SSBP1-201ENST00000265304 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
SSBP1-201ENST00000265304 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
SSBP1-201ENST00000265304 ZC3H4Q9UPT8 1303 aaKnown RBP17.58■□□□□ 0.4
SSBP1-201ENST00000265304 SLC5A1P13866 664 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 IL1R1P14778 569 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 KLRK1P26718 216 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 TIMM10P62072 90 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 NUCB1Q02818 461 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 CLASRPQ8N2M8 674 aaKnown RBP17.58■□□□□ 0.4
SSBP1-201ENST00000265304 COA1Q9GZY4 146 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
SSBP1-201ENST00000265304 MYH13Q9UKX3 1938 aa17.58■□□□□ 0.4
SSBP1-201ENST00000265304 SALL3Q9BXA9 1300 aa17.57■□□□□ 0.4
SSBP1-201ENST00000265304 RASSF7Q02833 373 aa17.57■□□□□ 0.4
SSBP1-201ENST00000265304 PODNQ7Z5L7 613 aa17.57■□□□□ 0.4
SSBP1-201ENST00000265304 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
SSBP1-201ENST00000265304 XAGE2Q96GT9 111 aa17.57■□□□□ 0.4
SSBP1-201ENST00000265304 FZD9O00144 591 aa17.56■□□□□ 0.4
SSBP1-201ENST00000265304 KCNJ4P48050 445 aa17.56■□□□□ 0.4
SSBP1-201ENST00000265304 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
SSBP1-201ENST00000265304 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
SSBP1-201ENST00000265304 PDS5AQ29RF7 1337 aaKnown RBP17.55■□□□□ 0.4
SSBP1-201ENST00000265304 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 HIBADHP31937 336 aaKnown RBP17.55■□□□□ 0.4
SSBP1-201ENST00000265304 AOC3Q16853 763 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
SSBP1-201ENST00000265304 GPR101Q96P66 508 aaPredicted RBP17.55■□□□□ 0.4
SSBP1-201ENST00000265304 CD209Q9NNX6 404 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 IL1RAPL2Q9NP60 686 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
SSBP1-201ENST00000265304 FAM205AQ6ZU69 1335 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 SEMA3EO15041 775 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 ADORA1P30542 326 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 CAVIN4Q5BKX8 364 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 CCDC102BQ68D86 513 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 ZNF804AQ7Z570 1209 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 TIAM2Q8IVF5 1701 aa17.54■□□□□ 0.4
SSBP1-201ENST00000265304 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
SSBP1-201ENST00000265304 GYG1P46976 350 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 BCAMP50895 628 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 AACSQ86V21 672 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 CHD1LQ86WJ1 897 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSBP1-201ENST00000265304 CCDC136Q96JN2 1154 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 STAP2Q9UGK3 403 aa17.53■□□□□ 0.4
SSBP1-201ENST00000265304 YDJCA8MPS7 323 aa17.52■□□□□ 0.4
SSBP1-201ENST00000265304 RIMBP2O15034 1052 aa17.52■□□□□ 0.4
SSBP1-201ENST00000265304 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.4
SSBP1-201ENST00000265304 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.4
SSBP1-201ENST00000265304 JDP2Q8WYK2 163 aa17.52■□□□□ 0.4
SSBP1-201ENST00000265304 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.4
SSBP1-201ENST00000265304 ECE2O60344 883 aa17.51■□□□□ 0.39
SSBP1-201ENST00000265304 PHKA1P46020 1223 aa17.51■□□□□ 0.39
SSBP1-201ENST00000265304 FKBP1AP62942 108 aaKnown RBP17.51■□□□□ 0.39
SSBP1-201ENST00000265304 NIM1KQ8IY84 436 aa17.51■□□□□ 0.39
SSBP1-201ENST00000265304 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
SSBP1-201ENST00000265304 OSBPL3Q9H4L5 887 aa17.51■□□□□ 0.39
SSBP1-201ENST00000265304 TLR7Q9NYK1 1049 aaKnown RBP17.51■□□□□ 0.39
SSBP1-201ENST00000265304 APBB1O00213 710 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 IGSF3O75054 1194 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 VIL1P09327 827 aaKnown RBP17.5■□□□□ 0.39
SSBP1-201ENST00000265304 IFIT2P09913 472 aaKnown RBP17.5■□□□□ 0.39
SSBP1-201ENST00000265304 UQCRFS1P1P0C7P4 283 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 ATP5JP18859 108 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 STRIP1Q5VSL9 837 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 GNL3LQ9NVN8 582 aaKnown RBP17.5■□□□□ 0.39
SSBP1-201ENST00000265304 RNF181Q9P0P0 153 aa17.5■□□□□ 0.39
SSBP1-201ENST00000265304 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
SSBP1-201ENST00000265304 CXCL9Q07325 125 aa17.49■□□□□ 0.39
SSBP1-201ENST00000265304 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
SSBP1-201ENST00000265304 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
SSBP1-201ENST00000265304 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
SSBP1-201ENST00000265304 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
SSBP1-201ENST00000265304 MYO5AQ9Y4I1 1855 aaKnown RBP17.49■□□□□ 0.39
SSBP1-201ENST00000265304 SALL1Q9NSC2 1324 aa17.48■□□□□ 0.39
SSBP1-201ENST00000265304 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
SSBP1-201ENST00000265304 GMLQ99445 158 aa17.48■□□□□ 0.39
SSBP1-201ENST00000265304 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
SSBP1-201ENST00000265304 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms