RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 LZTFL1Q9NQ48 299 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 ADAMTS12P58397 1594 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 TACC1O75410 805 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 CDC5LQ99459 802 aaKnown RBP20.45■□□□□ 0.86
COL5A3-201ENST00000264828 A2MP01023 1474 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 IGSF3O75054 1194 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 RHOXF2BP0C7M4 288 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 ARL1P40616 181 aaPredicted RBP20.45■□□□□ 0.86
COL5A3-201ENST00000264828 RHOXF2Q9BQY4 288 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 CABP5Q9NP86 173 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 FBLN1P23142 703 aa20.45■□□□□ 0.86
COL5A3-201ENST00000264828 STX17P56962 302 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 PHACTR2O75167 634 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 HLA-DOAP06340 250 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 TYRO3Q06418 890 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 ZNF354CQ86Y25 554 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CCDC63Q8NA47 563 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 KRT23Q9C075 422 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CHPF2Q9P2E5 772 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 SBNO2Q9Y2G9 1366 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 NBPF7P0C2Y1 421 aaPredicted RBP20.44■□□□□ 0.86
COL5A3-201ENST00000264828 DDX23Q9BUQ8 820 aaKnown RBP20.44■□□□□ 0.86
COL5A3-201ENST00000264828 PCDHB15Q9Y5E8 787 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 PABPN1LA6NDY0 278 aaKnown RBP20.44■□□□□ 0.86
COL5A3-201ENST00000264828 PDE1AP54750 535 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CCDC129Q6ZRS4 1044 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 GUCA1BQ9UMX6 200 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 ZKSCAN5Q9Y2L8 839 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 EIF2AK4Q9P2K8 1649 aaKnown RBP20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CYP7A1P22680 504 aa20.44■□□□□ 0.86
COL5A3-201ENST00000264828 CHRNA2Q15822 529 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 HDAC1Q13547 482 aaPredicted RBP20.43■□□□□ 0.86
COL5A3-201ENST00000264828 CEP57Q86XR8 500 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 ERMNQ8TAM6 284 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 IFT81Q8WYA0 676 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 MSH6P52701 1360 aa20.43■□□□□ 0.86
COL5A3-201ENST00000264828 LDHCP07864 332 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 SYT10Q6XYQ8 523 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 CCDC121Q6ZUS5 278 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
COL5A3-201ENST00000264828 ZEB2O60315 1214 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 EEF2P13639 858 aaKnown RBP20.42■□□□□ 0.86
COL5A3-201ENST00000264828 NMIQ13287 307 aaPredicted RBP20.42■□□□□ 0.86
COL5A3-201ENST00000264828 ZNF569Q5MCW4 686 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 CCDC50Q8IVM0 306 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 TMEM87AQ8NBN3 555 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 UBXN1Q04323 297 aa20.42■□□□□ 0.86
COL5A3-201ENST00000264828 PSMA7O14818 248 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 MCMDC2Q4G0Z9 681 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 OTUD6BQ8N6M0 293 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 SREK1Q8WXA9 508 aaKnown RBP20.41■□□□□ 0.86
COL5A3-201ENST00000264828 RALGAPBQ86X10 1494 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 ANKS4BQ8N8V4 417 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
COL5A3-201ENST00000264828 DPH6Q7L8W6 267 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 DDX12PQ92771 950 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 F8W031 263 aaPredicted RBP20.4■□□□□ 0.86
COL5A3-201ENST00000264828 IFNKQ9P0W0 207 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 CALM1P0DP23 149 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 CALM2P0DP24 149 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 CALM3P0DP25 149 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 NAPAP54920 295 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 ZBTB16Q05516 673 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 UHRF1BP1LA0JNW5 1464 aa20.4■□□□□ 0.86
COL5A3-201ENST00000264828 SPTLC2O15270 562 aa20.39■□□□□ 0.86
COL5A3-201ENST00000264828 KIF5AQ12840 1032 aa20.39■□□□□ 0.86
COL5A3-201ENST00000264828 PAXIP1Q6ZW49 1069 aaPredicted RBP20.39■□□□□ 0.85
COL5A3-201ENST00000264828 SPAG1Q07617 926 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 ESR2Q92731 530 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 SSX2IPQ9Y2D8 614 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 PICALMQ13492 652 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 PLIN2Q99541 437 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
COL5A3-201ENST00000264828 KRT83P78385 493 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 APOBRQ0VD83 1088 aa20.39■□□□□ 0.85
COL5A3-201ENST00000264828 ANKRD13DQ6ZTN6 518 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 CCDC77Q9BR77 488 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
COL5A3-201ENST00000264828 BMP15O95972 392 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 MRPS9P82933 396 aaKnown RBP20.38■□□□□ 0.85
COL5A3-201ENST00000264828 CCDC25Q86WR0 208 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 KRT86O43790 486 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 AKNAD1Q5T1N1 836 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 ZGPATQ8N5A5 531 aaKnown RBP20.38■□□□□ 0.85
COL5A3-201ENST00000264828 AK2P54819 239 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 C8orf34Q49A92 452 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 PPP1R9BQ96SB3 815 aa20.38■□□□□ 0.85
COL5A3-201ENST00000264828 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
COL5A3-201ENST00000264828 STMN4Q9H169 189 aaPredicted RBP20.37■□□□□ 0.85
COL5A3-201ENST00000264828 PSMC4P43686 418 aa20.37■□□□□ 0.85
COL5A3-201ENST00000264828 CCDC42Q96M95 316 aa20.37■□□□□ 0.85
COL5A3-201ENST00000264828 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms