RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 PLVAPQ9BX97 442 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 LIG1P18858 919 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 CLUL1Q15846 466 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 SKIDA1Q1XH10 827 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 LMOD1P29536 600 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 IQSEC3Q9UPP2 1182 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 PSME1Q06323 249 aa13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 CARD14Q9BXL6 1004 aa13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 FLT4P35916 1363 aa13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 WASLO00401 505 aaPredicted RBP13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 CNNM2Q9H8M5 875 aa13.28□□□□□ -0.28
DNMT3A-201ENST00000264709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■■ 151.4
DNMT3A-201ENST00000264709 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 SIL1Q9H173 461 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 TSKSQ9UJT2 592 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 MYH10P35580 1976 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 MLKLQ8NB16 471 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 TSG101Q99816 390 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 SLC8A1P32418 973 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 AIDAQ96BJ3 306 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.27□□□□□ -0.28
DNMT3A-201ENST00000264709 APBA1Q02410 837 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 MCMDC2Q4G0Z9 681 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 USP16Q9Y5T5 823 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 A0A1W2PQ27 194 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 A0A1W2PQ64 194 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 A0A1W2PQD8 194 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 GOLGA6BA6NDN3 693 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC172P0C7W6 258 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 BIN1O00499 593 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 CFAP58Q5T655 872 aa13.27□□□□□ -0.29
DNMT3A-201ENST00000264709 KIF1CO43896 1103 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 DESP17661 470 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 A0A087WZG4 1122 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 CETN2P41208 172 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 SSRP1Q08945 709 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 BICDL2A1A5D9 508 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 RASAL2Q9UJF2 1139 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC38Q502W7 563 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 KLHL10Q6JEL2 608 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 PSMA7O14818 248 aa13.26□□□□□ -0.29
DNMT3A-201ENST00000264709 CPSF1Q10570 1443 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 RILPL1Q5EBL4 403 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 RBM6P78332 1123 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 TRIML1Q8N9V2 468 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 STX10O60499 249 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 ACTN2P35609 894 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 HLTFQ14527 1009 aaKnown RBP eCLIP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 CYP26C1Q6V0L0 522 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 ABCA8O94911 1581 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 SPECC1Q5M775 1068 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 LUC7L2Q9Y383 392 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 MAATS1Q7Z4T9 603 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 CDK12Q9NYV4 1490 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 AKR1B10O60218 316 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 BOLA2Q9H3K6 86 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 ATP7BP35670 1465 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 TNNC1P63316 161 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
DNMT3A-201ENST00000264709 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 KIF5BP33176 963 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC129Q6ZRS4 1044 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 ZNF213O14771 459 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
DNMT3A-201ENST00000264709 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms