RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 TEX13AQ9BXU3 409 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 SAGE1Q9NXZ1 904 aa8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 VPS9D1Q9Y2B5 631 aa8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 USP16Q9Y5T5 823 aa8.9□□□□□ -0.98
SMARCE1-201ENST00000264640 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 HLFQ16534 295 aa8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 RGMBQ6NW40 437 aa8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 WWC1Q8IX03 1113 aa8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 IL17REQ8NFR9 667 aa8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 RPGRQ92834 1020 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
SMARCE1-201ENST00000264640 RIC1Q4ADV7 1423 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 RAD17O75943 681 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 NEFMP07197 916 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 ZNF157P51786 506 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 CRY2Q49AN0 593 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 CLEC4GQ6UXB4 293 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 CDC37L1Q7L3B6 337 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 BCL2L13Q9BXK5 485 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 PGAP2Q9UHJ9 254 aa8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 RBBP6Q7Z6E9 1792 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-201ENST00000264640 ADM5C9JUS6 153 aa8.87□□□□□ -0.99
SMARCE1-201ENST00000264640 FXR1P51114 621 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMARCE1-201ENST00000264640 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
SMARCE1-201ENST00000264640 GBA2Q9HCG7 927 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-201ENST00000264640 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 MAPK8IP3Q9UPT6 1336 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 HTTP42858 3142 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 EGFRP00533 1210 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 U2AF1L5P0DN76 240 aaPredicted RBP8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 FOSBP53539 338 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 U2AF1Q01081 240 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 KRT26Q7Z3Y9 468 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 CSRNP1Q96S65 589 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 RYDENQ9NUL5 291 aaKnown RBP8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 ZNRF3Q9ULT6 936 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 CENPFP49454 3210 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 TRIOBPQ9H2D6 2365 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 DUOX1Q9NRD9 1551 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 CEP290O15078 2479 aa8.86□□□□□ -0.99
SMARCE1-201ENST00000264640 IL16Q14005 1332 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 SZT2Q5T011 3432 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 BTBD11A6QL63 1104 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 GNAT3A8MTJ3 354 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 BHMG1C9JSJ3 638 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 SLC10A3P09131 477 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 GPTP24298 496 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 C20orf194Q5TEA3 1177 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 C2orf69Q8N8R5 385 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 ZNF454Q8N9F8 522 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 CNOT7Q9UIV1 285 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
SMARCE1-201ENST00000264640 UBN2Q6ZU65 1347 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 CDHR2Q9BYE9 1310 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 KIAA0100Q14667 2235 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 YDJCA8MPS7 323 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 TBC1D8O95759 1140 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 HOXA10P31260 410 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 TBC1D10BQ4KMP7 808 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 ZNF296Q8WUU4 475 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 NYXQ9GZU5 481 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 BRCA2P51587 3418 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 CEMIPQ8WUJ3 1361 aa8.84□□□□□ -0.99
SMARCE1-201ENST00000264640 KDM3BQ7LBC6 1761 aa8.84□□□□□ -1
SMARCE1-201ENST00000264640 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 H7C1D1 291 aa8.83□□□□□ -1
SMARCE1-201ENST00000264640 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 CALD1Q05682 793 aaKnown RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 NEUROD2Q15784 382 aa8.83□□□□□ -1
SMARCE1-201ENST00000264640 GRIPAP1Q4V328 841 aa8.83□□□□□ -1
SMARCE1-201ENST00000264640 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 RASAL3Q86YV0 1011 aa8.83□□□□□ -1
SMARCE1-201ENST00000264640 CRAMP1Q96RY5 1269 aa8.83□□□□□ -1
SMARCE1-201ENST00000264640 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 RWDD1Q9H446 243 aaPredicted RBP8.83□□□□□ -1
SMARCE1-201ENST00000264640 ABCC4O15439 1325 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 ASTN2O75129 1339 aaPredicted RBP8.82□□□□□ -1
SMARCE1-201ENST00000264640 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
SMARCE1-201ENST00000264640 BCAR3O75815 825 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 SNRPA1P09661 255 aaKnown RBP8.82□□□□□ -1
SMARCE1-201ENST00000264640 TNIP1Q15025 636 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 PKN2Q16513 984 aaKnown RBP8.82□□□□□ -1
SMARCE1-201ENST00000264640 SUSD4Q5VX71 490 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 DPP8Q6V1X1 898 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms