RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TAF5LO75529 589 aa20.29■□□□□ 0.84
USE1-201ENST00000263897 KCNJ4P48050 445 aa20.29■□□□□ 0.84
USE1-201ENST00000263897 ZNF280AP59817 542 aaPredicted RBP20.29■□□□□ 0.84
USE1-201ENST00000263897 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
USE1-201ENST00000263897 LDHAL6AQ6ZMR3 332 aa20.29■□□□□ 0.84
USE1-201ENST00000263897 MIER1Q8N108 512 aa20.29■□□□□ 0.84
USE1-201ENST00000263897 HELBQ8NG08 1087 aaPredicted RBP20.29■□□□□ 0.84
USE1-201ENST00000263897 SMC4Q9NTJ3 1288 aa20.29■□□□□ 0.84
USE1-201ENST00000263897 ZNF609O15014 1411 aa20.28■□□□□ 0.84
USE1-201ENST00000263897 USP17L8P0C7I0 530 aa20.28■□□□□ 0.84
USE1-201ENST00000263897 KLRK1P26718 216 aa20.28■□□□□ 0.84
USE1-201ENST00000263897 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
USE1-201ENST00000263897 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
USE1-201ENST00000263897 SNAP23O00161 211 aa20.27■□□□□ 0.84
USE1-201ENST00000263897 CELF2O95319 508 aaKnown RBP20.27■□□□□ 0.84
USE1-201ENST00000263897 KIF4BQ2VIQ3 1234 aa20.27■□□□□ 0.84
USE1-201ENST00000263897 DACT2Q5SW24 774 aa20.27■□□□□ 0.84
USE1-201ENST00000263897 STRIP1Q5VSL9 837 aa20.27■□□□□ 0.84
USE1-201ENST00000263897 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
USE1-201ENST00000263897 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
USE1-201ENST00000263897 HSPA1AP0DMV8 641 aaKnown RBP20.26■□□□□ 0.83
USE1-201ENST00000263897 HSPA1BP0DMV9 641 aaKnown RBP20.26■□□□□ 0.83
USE1-201ENST00000263897 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
USE1-201ENST00000263897 DCPSQ96C86 337 aaKnown RBP20.26■□□□□ 0.83
USE1-201ENST00000263897 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
USE1-201ENST00000263897 CNNM1Q9NRU3 951 aa20.26■□□□□ 0.83
USE1-201ENST00000263897 TLL2Q9Y6L7 1015 aa20.26■□□□□ 0.83
USE1-201ENST00000263897 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
USE1-201ENST00000263897 RABL6Q3YEC7 729 aaPredicted RBP20.25■□□□□ 0.83
USE1-201ENST00000263897 TTLL5Q6EMB2 1281 aa20.25■□□□□ 0.83
USE1-201ENST00000263897 KRT26Q7Z3Y9 468 aa20.25■□□□□ 0.83
USE1-201ENST00000263897 PLIN1O60240 522 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 DLK2Q6UY11 383 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 MYOZ2Q9NPC6 264 aa20.24■□□□□ 0.83
USE1-201ENST00000263897 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
USE1-201ENST00000263897 WDR33Q9C0J8 1336 aaKnown RBP20.24■□□□□ 0.83
USE1-201ENST00000263897 SCARF1Q14162 830 aa20.23■□□□□ 0.83
USE1-201ENST00000263897 SAPCD2Q86UD0 394 aa20.23■□□□□ 0.83
USE1-201ENST00000263897 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
USE1-201ENST00000263897 PUS3Q9BZE2 481 aaKnown RBP20.23■□□□□ 0.83
USE1-201ENST00000263897 ZNF408Q9H9D4 720 aa20.23■□□□□ 0.83
USE1-201ENST00000263897 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
USE1-201ENST00000263897 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
USE1-201ENST00000263897 GTF2IP78347 998 aa20.22■□□□□ 0.83
USE1-201ENST00000263897 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
USE1-201ENST00000263897 GGA3Q9NZ52 723 aa20.22■□□□□ 0.83
USE1-201ENST00000263897 RIPOR2Q9Y4F9 1068 aa20.22■□□□□ 0.83
USE1-201ENST00000263897 PCNTO95613 3336 aa20.22■□□□□ 0.83
USE1-201ENST00000263897 ASTN2O75129 1339 aaPredicted RBP20.22■□□□□ 0.83
USE1-201ENST00000263897 ECE1P42892 770 aa20.21■□□□□ 0.83
USE1-201ENST00000263897 MMP14P50281 582 aa20.21■□□□□ 0.83
USE1-201ENST00000263897 ZNF804AQ7Z570 1209 aa20.21■□□□□ 0.83
USE1-201ENST00000263897 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
USE1-201ENST00000263897 CAPNS2Q96L46 248 aa20.21■□□□□ 0.83
USE1-201ENST00000263897 ADM5C9JUS6 153 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 IL1R1P14778 569 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 UBE4AQ14139 1066 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 ANGEL2Q5VTE6 544 aaKnown RBP20.2■□□□□ 0.82
USE1-201ENST00000263897 CYP4F22Q6NT55 531 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 PAXIP1Q6ZW49 1069 aaPredicted RBP20.2■□□□□ 0.82
USE1-201ENST00000263897 HHIPL1Q96JK4 782 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
USE1-201ENST00000263897 A0A1B0GUL6 1792 aa20.2■□□□□ 0.82
USE1-201ENST00000263897 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
USE1-201ENST00000263897 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
USE1-201ENST00000263897 WBP1LQ9NX94 342 aa20.19■□□□□ 0.82
USE1-201ENST00000263897 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
USE1-201ENST00000263897 IFFO2Q5TF58 517 aa20.18■□□□□ 0.82
USE1-201ENST00000263897 ARHGAP45Q92619 1136 aa20.18■□□□□ 0.82
USE1-201ENST00000263897 MROH5Q6ZUA9 1318 aa20.18■□□□□ 0.82
USE1-201ENST00000263897 GRM1Q13255 1194 aa20.17■□□□□ 0.82
USE1-201ENST00000263897 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
USE1-201ENST00000263897 KIAA0825Q8IV33 1275 aa20.17■□□□□ 0.82
USE1-201ENST00000263897 HDAC9Q9UKV0 1011 aa20.17■□□□□ 0.82
USE1-201ENST00000263897 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
USE1-201ENST00000263897 WNT10BO00744 389 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 FOXN1O15353 648 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 SASH1O94885 1247 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
USE1-201ENST00000263897 CERS5Q8N5B7 392 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 C2orf69Q8N8R5 385 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
USE1-201ENST00000263897 FAM84BQ96KN1 310 aaPredicted RBP20.16■□□□□ 0.82
USE1-201ENST00000263897 GBA2Q9HCG7 927 aaPredicted RBP20.16■□□□□ 0.82
USE1-201ENST00000263897 UBTFL1P0CB47 393 aaPredicted RBP20.15■□□□□ 0.82
USE1-201ENST00000263897 HIBADHP31937 336 aaKnown RBP20.15■□□□□ 0.82
USE1-201ENST00000263897 MAP2K2P36507 400 aa20.15■□□□□ 0.82
USE1-201ENST00000263897 HUNKP57058 714 aa20.15■□□□□ 0.82
USE1-201ENST00000263897 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
USE1-201ENST00000263897 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
USE1-201ENST00000263897 TDRD7Q8NHU6 1098 aaKnown RBP20.15■□□□□ 0.82
USE1-201ENST00000263897 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
USE1-201ENST00000263897 CDCA5Q96FF9 252 aa20.15■□□□□ 0.82
USE1-201ENST00000263897 KIF16BQ96L93 1317 aa20.15■□□□□ 0.82
USE1-201ENST00000263897 GYG1P46976 350 aa20.14■□□□□ 0.81
USE1-201ENST00000263897 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
USE1-201ENST00000263897 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms