RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 FAM160A1Q05DH4 1040 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 KBTBD3Q8NAB2 608 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 COPRSQ9NQ92 184 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 IFNKQ9P0W0 207 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 PFKFB2O60825 505 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 TATP17735 454 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-201ENST00000263856 MARCKSP29966 332 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-201ENST00000263856 DPCR1Q3MIW9 517 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.09
CHMP3-201ENST00000263856 HAUS7Q99871 368 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 SLC52A2Q9HAB3 445 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
CHMP3-201ENST00000263856 LMOD1P29536 600 aaPredicted RBP14.46□□□□□ -0.1
CHMP3-201ENST00000263856 NDUFA8P51970 172 aa14.46□□□□□ -0.1
CHMP3-201ENST00000263856 GNL2Q13823 731 aaKnown RBP14.46□□□□□ -0.1
CHMP3-201ENST00000263856 LRRC24Q50LG9 513 aa14.46□□□□□ -0.1
CHMP3-201ENST00000263856 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.1
CHMP3-201ENST00000263856 MRPS27Q92552 414 aaKnown RBP14.46□□□□□ -0.1
CHMP3-201ENST00000263856 TMX1Q9H3N1 280 aa14.46□□□□□ -0.1
CHMP3-201ENST00000263856 CLIC4Q9Y696 253 aa14.46□□□□□ -0.1
CHMP3-201ENST00000263856 A0A0U1RQG5 324 aaPredicted RBP14.45□□□□□ -0.1
CHMP3-201ENST00000263856 HSPD1P10809 573 aaKnown RBP14.45□□□□□ -0.1
CHMP3-201ENST00000263856 USPL1Q5W0Q7 1092 aa14.45□□□□□ -0.1
CHMP3-201ENST00000263856 CGNQ9P2M7 1197 aaKnown RBP14.45□□□□□ -0.1
CHMP3-201ENST00000263856 KDM3BQ7LBC6 1761 aa14.45□□□□□ -0.1
CHMP3-201ENST00000263856 CTAGE5O15320 804 aa14.45□□□□□ -0.1
CHMP3-201ENST00000263856 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
CHMP3-201ENST00000263856 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
CHMP3-201ENST00000263856 NAT10Q9H0A0 1025 aaKnown RBP14.45□□□□□ -0.1
CHMP3-201ENST00000263856 ERICH4A6NGS2 130 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 GOLGA8BA8MQT2 603 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 SNW1Q13573 536 aaKnown RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 SYT10Q6XYQ8 523 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 SYNE3Q6ZMZ3 975 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 KLF18A0A0U1RQI7 1052 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 RFX5P48382 616 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 KIF18AQ8NI77 898 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 ZBTB9Q96C00 473 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 XPO4Q9C0E2 1151 aaKnown RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 CTNNA3Q9UI47 895 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 RCOR1Q9UKL0 485 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 UTYO14607 1347 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 SNRPA1P09661 255 aaKnown RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 CABP4P57796 275 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 TSGA10IPQ3SY00 556 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 KRT28Q7Z3Y7 464 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 OGFRQ9NZT2 677 aa14.44□□□□□ -0.1
CHMP3-201ENST00000263856 ORC3Q9UBD5 711 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-201ENST00000263856 HMGB1P09429 215 aaKnown RBP14.43□□□□□ -0.1
CHMP3-201ENST00000263856 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
CHMP3-201ENST00000263856 MRFAP1L1Q96HT8 127 aa14.43□□□□□ -0.1
CHMP3-201ENST00000263856 PUS3Q9BZE2 481 aaKnown RBP14.43□□□□□ -0.1
CHMP3-201ENST00000263856 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
CHMP3-201ENST00000263856 MAST3O60307 1309 aa14.43□□□□□ -0.1
CHMP3-201ENST00000263856 M0R2C6 588 aa14.43□□□□□ -0.1
CHMP3-201ENST00000263856 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-201ENST00000263856 CARMIL3Q8ND23 1372 aa14.43□□□□□ -0.1
CHMP3-201ENST00000263856 APPP05067 770 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 CCZ1BP86790 482 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 CCZ1P86791 482 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 TTLL7Q6ZT98 887 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 ST7Q9NRC1 585 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 A0A1B0GUL7 405 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 SLC3A2P08195 630 aaKnown RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 SFPQP23246 707 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 UTP14CQ5TAP6 766 aaKnown RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 RALYLQ86SE5 291 aaKnown RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 CCAR2Q8N163 923 aaKnown RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 ALDH8A1Q9H2A2 487 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 KMT5BQ4FZB7 885 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-201ENST00000263856 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
CHMP3-201ENST00000263856 CAVIN2O95810 425 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 PHKG2P15735 406 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 TTC39AQ5SRH9 613 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 FEZ1Q99689 392 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 LLPHQ9BRT6 129 aaKnown RBP14.41□□□□□ -0.1
CHMP3-201ENST00000263856 ERCC6LQ2NKX8 1250 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 FBXO38Q6PIJ6 1188 aa14.41□□□□□ -0.1
CHMP3-201ENST00000263856 SPTLC2O15270 562 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 PRC1O43663 620 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 SERPINC1P01008 464 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 TPM4P67936 248 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 OSBP2Q969R2 916 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-201ENST00000263856 NRDCO43847 1150 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 A1BGP04217 495 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 CDC25BP30305 580 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 LRRN4CLQ8ND94 238 aa14.4□□□□□ -0.1
CHMP3-201ENST00000263856 ERBB3P21860 1342 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms