RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CEP126Q9P2H0 1117 aa22.71■■□□□ 1.23
SDF4-201ENST00000263741 JDP2Q8WYK2 163 aa22.7■■□□□ 1.23
SDF4-201ENST00000263741 BCL11AQ9H165 835 aa22.7■■□□□ 1.23
SDF4-201ENST00000263741 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
SDF4-201ENST00000263741 YDJCA8MPS7 323 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 ECE2O60344 883 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
SDF4-201ENST00000263741 ZNF609O15014 1411 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 GYG1P46976 350 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 ATP2B3Q16720 1220 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 KCNQ5Q9NR82 932 aa22.69■■□□□ 1.22
SDF4-201ENST00000263741 FGFR2P21802 821 aa22.68■■□□□ 1.22
SDF4-201ENST00000263741 UBE4AQ14139 1066 aa22.68■■□□□ 1.22
SDF4-201ENST00000263741 ZNF526Q8TF50 670 aaPredicted RBP22.68■■□□□ 1.22
SDF4-201ENST00000263741 G3V3G9 751 aa22.67■■□□□ 1.22
SDF4-201ENST00000263741 YY1P25490 414 aa22.67■■□□□ 1.22
SDF4-201ENST00000263741 DCAF8Q5TAQ9 597 aa22.67■■□□□ 1.22
SDF4-201ENST00000263741 RAD17O75943 681 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 ADORA1P30542 326 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 VPS33BQ9H267 617 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 FZD9O00144 591 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 TIMM10P62072 90 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 ZNRF3Q9ULT6 936 aa22.66■■□□□ 1.22
SDF4-201ENST00000263741 A0A1B0GUL7 405 aa22.65■■□□□ 1.22
SDF4-201ENST00000263741 IL1RAPL2Q9NP60 686 aa22.65■■□□□ 1.22
SDF4-201ENST00000263741 SLC5A1P13866 664 aa22.64■■□□□ 1.22
SDF4-201ENST00000263741 LPIN2Q92539 896 aa22.64■■□□□ 1.22
SDF4-201ENST00000263741 IQSEC3Q9UPP2 1182 aaPredicted RBP22.64■■□□□ 1.22
SDF4-201ENST00000263741 FAM84BQ96KN1 310 aaPredicted RBP22.64■■□□□ 1.21
SDF4-201ENST00000263741 JAG2Q9Y219 1238 aa22.64■■□□□ 1.21
SDF4-201ENST00000263741 GJA3Q9Y6H8 435 aa22.64■■□□□ 1.21
SDF4-201ENST00000263741 DDNO94850 711 aaPredicted RBP22.63■■□□□ 1.21
SDF4-201ENST00000263741 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
SDF4-201ENST00000263741 CXCL9Q07325 125 aa22.63■■□□□ 1.21
SDF4-201ENST00000263741 C15orf52Q6ZUT6 534 aaKnown RBP22.63■■□□□ 1.21
SDF4-201ENST00000263741 BCAMP50895 628 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 EIF6P56537 245 aaKnown RBP22.62■■□□□ 1.21
SDF4-201ENST00000263741 ZNF804AQ7Z570 1209 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 RHPN1Q8TCX5 695 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 FBXW7Q969H0 707 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 NEUROD6Q96NK8 337 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 CD209Q9NNX6 404 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
SDF4-201ENST00000263741 TNNI3KQ59H18 835 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 COA1Q9GZY4 146 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 TLR7Q9NYK1 1049 aaKnown RBP22.62■■□□□ 1.21
SDF4-201ENST00000263741 FPGT-TNNI3KV9GXZ4 949 aa22.62■■□□□ 1.21
SDF4-201ENST00000263741 SMARCA5O60264 1052 aaPredicted RBP22.61■■□□□ 1.21
SDF4-201ENST00000263741 HIBADHP31937 336 aaKnown RBP22.61■■□□□ 1.21
SDF4-201ENST00000263741 AAMPQ13685 434 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 VPS37DQ86XT2 251 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 XAGE2Q96GT9 111 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 MXD3Q9BW11 206 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 DCTPP1Q9H773 170 aa22.61■■□□□ 1.21
SDF4-201ENST00000263741 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
SDF4-201ENST00000263741 PSMD14O00487 310 aa22.6■■□□□ 1.21
SDF4-201ENST00000263741 HSP90AB4PQ58FF6 505 aa22.6■■□□□ 1.21
SDF4-201ENST00000263741 AKAP2Q9Y2D5 859 aa22.6■■□□□ 1.21
SDF4-201ENST00000263741 WDR90Q96KV7 1748 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 IGHDP01880 384 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 PHKA1P46020 1223 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 CIAPIN1Q6FI81 312 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 EAF2Q96CJ1 260 aaPredicted RBP22.59■■□□□ 1.21
SDF4-201ENST00000263741 CCDC8Q9H0W5 538 aaPredicted RBP22.59■■□□□ 1.21
SDF4-201ENST00000263741 HDAC1Q13547 482 aaPredicted RBP22.59■■□□□ 1.21
SDF4-201ENST00000263741 CAVIN4Q5BKX8 364 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 FBXO33Q7Z6M2 555 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 KIF1BPQ96EK5 621 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 DBNDD2Q9BQY9 259 aa22.59■■□□□ 1.21
SDF4-201ENST00000263741 ZBTB12Q9Y330 459 aaPredicted RBP22.59■■□□□ 1.21
SDF4-201ENST00000263741 GLTPD2A6NH11 291 aa22.58■■□□□ 1.21
SDF4-201ENST00000263741 PODNQ7Z5L7 613 aa22.58■■□□□ 1.21
SDF4-201ENST00000263741 AACSQ86V21 672 aa22.58■■□□□ 1.21
SDF4-201ENST00000263741 AKAP11Q9UKA4 1901 aa22.58■■□□□ 1.21
SDF4-201ENST00000263741 GTF2IP78347 998 aa22.58■■□□□ 1.2
SDF4-201ENST00000263741 ADAMTSL1Q8N6G6 1762 aa22.57■■□□□ 1.2
SDF4-201ENST00000263741 MYO5AQ9Y4I1 1855 aaKnown RBP22.57■■□□□ 1.2
SDF4-201ENST00000263741 RAB11FIP3O75154 756 aa22.57■■□□□ 1.2
SDF4-201ENST00000263741 IL1R1P14778 569 aa22.57■■□□□ 1.2
SDF4-201ENST00000263741 DBNLQ9UJU6 430 aaKnown RBP22.57■■□□□ 1.2
SDF4-201ENST00000263741 SCN4AP35499 1836 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 CCDC102BQ68D86 513 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 DPY19L2Q6NUT2 758 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 GPC2Q8N158 579 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 LRRCC1Q9C099 1032 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 NMRK2Q9NPI5 230 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 GPR108Q9NPR9 543 aa22.56■■□□□ 1.2
SDF4-201ENST00000263741 CHAF1AQ13111 956 aaPredicted RBP22.56■■□□□ 1.2
SDF4-201ENST00000263741 TDRD7Q8NHU6 1098 aaKnown RBP22.56■■□□□ 1.2
SDF4-201ENST00000263741 SHTN1A0MZ66 631 aa22.55■■□□□ 1.2
SDF4-201ENST00000263741 USP17L3A6NCW0 530 aa22.55■■□□□ 1.2
SDF4-201ENST00000263741 USP17L4A6NCW7 530 aa22.55■■□□□ 1.2
SDF4-201ENST00000263741 GORABQ5T7V8 394 aa22.55■■□□□ 1.2
SDF4-201ENST00000263741 USP17L1Q7RTZ2 530 aa22.55■■□□□ 1.2
SDF4-201ENST00000263741 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
SDF4-201ENST00000263741 GMPSP49915 693 aaPredicted RBP22.54■■□□□ 1.2
SDF4-201ENST00000263741 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
SDF4-201ENST00000263741 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
SDF4-201ENST00000263741 DACT2Q5SW24 774 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms