RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 MMRN2Q9H8L6 949 aa19.23■□□□□ 0.67
CROCCP3-201ENST00000263511 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.23■□□□□ 0.677e-8■■■■■ 31
CROCCP3-201ENST00000263511 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 SMC1AQ14683 1233 aaKnown RBP19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 C16orf45Q96MC5 204 aaPredicted RBP19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 CDCA7Q9BWT1 371 aaPredicted RBP19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 VAMP4O75379 141 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 PSMA7O14818 248 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 HSPA2P54652 639 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 MAGEB6Q8N7X4 407 aa19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 PPM1FP49593 454 aaPredicted RBP19.22■□□□□ 0.67
CROCCP3-201ENST00000263511 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 PHACTR2O75167 634 aa19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 PLVAPQ9BX97 442 aa19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 TMX1Q9H3N1 280 aa19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 ASIC1P78348 528 aa19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 TFCP2Q12800 502 aa19.21■□□□□ 0.67
CROCCP3-201ENST00000263511 SNW1Q13573 536 aaKnown RBP19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 TRAPPC3LQ5T215 181 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 MIGA1Q8NAN2 632 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 SYNCQ9H7C4 482 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 UBASH3AP57075 661 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 JADE2Q9NQC1 790 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 KRT79Q5XKE5 535 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 INCENPQ9NQS7 918 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 COMMD10Q9Y6G5 202 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 ZMYM3Q14202 1370 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 GNPATO15228 680 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 RBM26Q5T8P6 1007 aaKnown RBP19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
CROCCP3-201ENST00000263511 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 BCCIPQ9P287 314 aaKnown RBP eCLIP19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 RIMBP2O15034 1052 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 GOLGA6L10A0A0M3HER8 536 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 MAP3K19Q56UN5 1328 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 STAMBPO95630 424 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 GNA11P29992 359 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 CYLC1P35663 651 aaPredicted RBP19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 PLS1Q14651 629 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 TTC6Q86TZ1 520 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 C16orf71Q8IYS4 520 aaPredicted RBP19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 TSPYL6Q8N831 410 aa19.19■□□□□ 0.66
CROCCP3-201ENST00000263511 LMTK3Q96Q04 1460 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 MARCKSP29966 332 aaPredicted RBP19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 IMPG2Q9BZV3 1241 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 RAD50Q92878 1312 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 HCLS1P14317 486 aaPredicted RBP19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 TNNI2P48788 182 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 FSD2A1L4K1 749 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 PARP10Q53GL7 1025 aa19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 CGNQ9P2M7 1197 aaKnown RBP19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 EIF2AK4Q9P2K8 1649 aaKnown RBP19.18■□□□□ 0.66
CROCCP3-201ENST00000263511 DENND2AQ9ULE3 1009 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 KRT2P35908 639 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 F13A1P00488 732 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 GNG11P61952 73 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 GRM1Q13255 1194 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 PRDM10Q9NQV6 1147 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 A0A1W2PP64 1363 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 SPTLC2O15270 562 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 CNBD1Q8NA66 436 aa19.17■□□□□ 0.66
CROCCP3-201ENST00000263511 NCBP1Q09161 790 aaKnown RBP19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 KIAA0753Q2KHM9 967 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 PHACTR3Q96KR7 559 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 GTPBP4Q9BZE4 634 aaKnown RBP19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 YTHDC2Q9H6S0 1430 aaKnown RBP19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 DHX32Q7L7V1 743 aaKnown RBP19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 CCDC171Q6TFL3 1326 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 KRT24Q2M2I5 525 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 CREB3L3Q68CJ9 461 aa19.16■□□□□ 0.66
CROCCP3-201ENST00000263511 LRSAM1Q6UWE0 723 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 DHX58Q96C10 678 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 UBE4AQ14139 1066 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 SH2D4AQ9H788 454 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 ERICH4A6NGS2 130 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 LMOD1P29536 600 aaPredicted RBP19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 CBX1P83916 185 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 USP48Q86UV5 1035 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 DDX12PQ92771 950 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 HOMER2Q9NSB8 354 aa19.15■□□□□ 0.66
CROCCP3-201ENST00000263511 PLBD2Q8NHP8 589 aa19.14■□□□□ 0.66
CROCCP3-201ENST00000263511 BABAM1Q9NWV8 329 aa19.14■□□□□ 0.66
CROCCP3-201ENST00000263511 DACT1Q9NYF0 836 aa19.14■□□□□ 0.66
CROCCP3-201ENST00000263511 FAM13AO94988 1023 aa19.14■□□□□ 0.65
CROCCP3-201ENST00000263511 ANO6Q4KMQ2 910 aa19.14■□□□□ 0.65
CROCCP3-201ENST00000263511 FAM200AQ8TCP9 573 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms