RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 KLRK1P26718 216 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 AOC3Q16853 763 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 TIMM10P62072 90 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 SMC5Q8IY18 1101 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 A0A1B0GUL7 405 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 IFIT1P09914 478 aaKnown RBP20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 SLC5A1P13866 664 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 TNNI3KQ59H18 835 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 LARGE2Q8N3Y3 721 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 FPGT-TNNI3KV9GXZ4 949 aa20.5■□□□□ 0.87
CHCHD3-201ENST00000262570 IL1RAPL2Q9NP60 686 aa20.49■□□□□ 0.87
CHCHD3-201ENST00000262570 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-201ENST00000262570 FAM84BQ96KN1 310 aaPredicted RBP20.48■□□□□ 0.87
CHCHD3-201ENST00000262570 ZNF609O15014 1411 aa20.48■□□□□ 0.87
CHCHD3-201ENST00000262570 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
CHCHD3-201ENST00000262570 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
CHCHD3-201ENST00000262570 NEUROD6Q96NK8 337 aa20.47■□□□□ 0.87
CHCHD3-201ENST00000262570 RNF181Q9P0P0 153 aa20.47■□□□□ 0.87
CHCHD3-201ENST00000262570 GYG1P46976 350 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 FBXO33Q7Z6M2 555 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 JDP2Q8WYK2 163 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 XAGE2Q96GT9 111 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 COL4A5P29400 1685 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 SBF1O95248 1867 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 SMARCA5O60264 1052 aaPredicted RBP20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 ADORA1P30542 326 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 DOK7Q18PE1 504 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 CAVIN4Q5BKX8 364 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 COA1Q9GZY4 146 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
CHCHD3-201ENST00000262570 HIBADHP31937 336 aaKnown RBP20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 BCAMP50895 628 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 ANKRD45Q5TZF3 282 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 ZNF804AQ7Z570 1209 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 PODNQ7Z5L7 613 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 AACSQ86V21 672 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 NIM1KQ8IY84 436 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 CCDC8Q9H0W5 538 aaPredicted RBP20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 CD209Q9NNX6 404 aa20.45■□□□□ 0.86
CHCHD3-201ENST00000262570 ECE2O60344 883 aa20.44■□□□□ 0.86
CHCHD3-201ENST00000262570 PPP4R2Q9NY27 417 aa20.44■□□□□ 0.86
CHCHD3-201ENST00000262570 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
CHCHD3-201ENST00000262570 G3V3G9 751 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 FZD9O00144 591 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 IL1R1P14778 569 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 DCAF8Q5TAQ9 597 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 DBNDD2Q9BQY9 259 aa20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 DBNLQ9UJU6 430 aaKnown RBP20.43■□□□□ 0.86
CHCHD3-201ENST00000262570 KDM2BQ8NHM5 1336 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 CCDC102BQ68D86 513 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 CCDC88AQ3V6T2 1871 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 PHKA1P46020 1223 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 NUCB1Q02818 461 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 TDRD7Q8NHU6 1098 aaKnown RBP20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 BCL11AQ9H165 835 aa20.42■□□□□ 0.86
CHCHD3-201ENST00000262570 IFIT2P09913 472 aaKnown RBP20.41■□□□□ 0.86
CHCHD3-201ENST00000262570 GORABQ5T7V8 394 aa20.41■□□□□ 0.86
CHCHD3-201ENST00000262570 KCNQ5Q9NR82 932 aa20.41■□□□□ 0.86
CHCHD3-201ENST00000262570 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 ZBTB22O15209 634 aa20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 CENPQQ7L2Z9 268 aaPredicted RBP20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 ARAP2Q8WZ64 1704 aa20.4■□□□□ 0.86
CHCHD3-201ENST00000262570 CXCL9Q07325 125 aa20.39■□□□□ 0.85
CHCHD3-201ENST00000262570 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.85
CHCHD3-201ENST00000262570 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.85
CHCHD3-201ENST00000262570 CCDC158Q5M9N0 1113 aa20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 C16orf71Q8IYS4 520 aaPredicted RBP20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 LNPKQ9C0E8 428 aa20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 IQSEC3Q9UPP2 1182 aaPredicted RBP20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 RAD17O75943 681 aa20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 ARID4AP29374 1257 aaPredicted RBP20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 EIF6P56537 245 aaKnown RBP20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 ZNF512BQ96KM6 892 aaPredicted RBP20.38■□□□□ 0.85
CHCHD3-201ENST00000262570 ZNF541Q9H0D2 1346 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 USP17L3A6NCW0 530 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 USP17L4A6NCW7 530 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 SEMA3EO15041 775 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 UQCRFS1P1P0C7P4 283 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 GTF2IP78347 998 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 TTC39AQ5SRH9 613 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 STRIP1Q5VSL9 837 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 USP17L1Q7RTZ2 530 aa20.36■□□□□ 0.85
CHCHD3-201ENST00000262570 FAM205AQ6ZU69 1335 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 CHD4Q14839 1912 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 PSMD14O00487 310 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 TNIP1Q15025 636 aa20.35■□□□□ 0.85
CHCHD3-201ENST00000262570 OTUD7AQ8TE49 926 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms