RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LEMD3Q9Y2U8 911 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 FANCIQ9NVI1 1328 aa15.58■□□□□ 0.08
TRAF4-202ENST00000262396 ANKRD18BA2A2Z9 1011 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 CCDC85CA6NKD9 419 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 H7C1W4 665 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
TRAF4-202ENST00000262396 DLK2Q6UY11 383 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 LINS1Q8NG48 757 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 COA1Q9GZY4 146 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 HDAC9Q9UKV0 1011 aa15.57■□□□□ 0.08
TRAF4-202ENST00000262396 NF2P35240 595 aa15.56■□□□□ 0.08
TRAF4-202ENST00000262396 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
TRAF4-202ENST00000262396 CDCA5Q96FF9 252 aa15.56■□□□□ 0.08
TRAF4-202ENST00000262396 ABHD8Q96I13 439 aa15.56■□□□□ 0.08
TRAF4-202ENST00000262396 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
TRAF4-202ENST00000262396 ZNF804BA4D1E1 1349 aa15.55■□□□□ 0.08
TRAF4-202ENST00000262396 MYO3BQ8WXR4 1341 aa15.55■□□□□ 0.08
TRAF4-202ENST00000262396 ZNF280AP59817 542 aaPredicted RBP15.55■□□□□ 0.08
TRAF4-202ENST00000262396 IFIT5Q13325 482 aaKnown RBP15.55■□□□□ 0.08
TRAF4-202ENST00000262396 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
TRAF4-202ENST00000262396 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
TRAF4-202ENST00000262396 SLC4A10Q6U841 1118 aa15.54■□□□□ 0.08
TRAF4-202ENST00000262396 C9orf78Q9NZ63 289 aaPredicted RBP15.54■□□□□ 0.08
TRAF4-202ENST00000262396 ASTN2O75129 1339 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-202ENST00000262396 VAMP4O75379 141 aa15.53■□□□□ 0.08
TRAF4-202ENST00000262396 KIF23Q02241 960 aaPredicted RBP15.53■□□□□ 0.08
TRAF4-202ENST00000262396 CCDC57Q2TAC2 916 aa15.53■□□□□ 0.08
TRAF4-202ENST00000262396 STRIP1Q5VSL9 837 aa15.53■□□□□ 0.08
TRAF4-202ENST00000262396 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
TRAF4-202ENST00000262396 COL4A1P02462 1669 aa15.53■□□□□ 0.08
TRAF4-202ENST00000262396 F6X3S4 739 aa15.52■□□□□ 0.08
TRAF4-202ENST00000262396 PLIN1O60240 522 aa15.52■□□□□ 0.08
TRAF4-202ENST00000262396 GTF2IP78347 998 aa15.52■□□□□ 0.08
TRAF4-202ENST00000262396 CHRNDQ07001 517 aa15.52■□□□□ 0.08
TRAF4-202ENST00000262396 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.08
TRAF4-202ENST00000262396 PITPNM2Q9BZ72 1349 aa15.51■□□□□ 0.07
TRAF4-202ENST00000262396 FKBP1BP68106 108 aa15.51■□□□□ 0.07
TRAF4-202ENST00000262396 DGKZQ13574 1117 aa15.51■□□□□ 0.07
TRAF4-202ENST00000262396 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
TRAF4-202ENST00000262396 MXD3Q9BW11 206 aa15.51■□□□□ 0.07
TRAF4-202ENST00000262396 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
TRAF4-202ENST00000262396 WTIPA6NIX2 430 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-202ENST00000262396 TRPA1O75762 1119 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 CSF1RP07333 972 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 MMP14P50281 582 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 NBPF9Q3BBW0 867 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 DACT2Q5SW24 774 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 ZNF804AQ7Z570 1209 aa15.5■□□□□ 0.07
TRAF4-202ENST00000262396 HELBQ8NG08 1087 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-202ENST00000262396 SCAF8Q9UPN6 1271 aaKnown RBP15.5■□□□□ 0.07
TRAF4-202ENST00000262396 TAF5LO75529 589 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 SASH1O94885 1247 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 LMBR1LQ6UX01 489 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 REM2Q8IYK8 340 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-202ENST00000262396 ZIC5Q96T25 663 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 GMLQ99445 158 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 SRCIN1Q9C0H9 1055 aa15.49■□□□□ 0.07
TRAF4-202ENST00000262396 UBE2Q2LH0YL09 131 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 GRM8O00222 908 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 MYO1BO43795 1136 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 SLC10A3P09131 477 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 RBM5P52756 815 aaKnown RBP eCLIP15.48■□□□□ 0.078e-14■■■■□ 26.3
TRAF4-202ENST00000262396 PRKG1Q13976 671 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 DLGAP5Q15398 846 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 ARMC9Q7Z3E5 817 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 TXNRD3Q86VQ6 643 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 APOBEC3FQ8IUX4 373 aaKnown RBP15.48■□□□□ 0.07
TRAF4-202ENST00000262396 MCOLN1Q9GZU1 580 aa15.48■□□□□ 0.07
TRAF4-202ENST00000262396 THSD7BQ9C0I4 1608 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 FAM155AB1AL88 458 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-202ENST00000262396 F8W031 263 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-202ENST00000262396 WNT10BO00744 389 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 ZNF609O15014 1411 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 KLRK1P26718 216 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 CD209Q9NNX6 404 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 SAGE1Q9NXZ1 904 aa15.47■□□□□ 0.07
TRAF4-202ENST00000262396 SCN9AQ15858 1988 aa15.46■□□□□ 0.07
TRAF4-202ENST00000262396 CASP7P55210 303 aa15.46■□□□□ 0.07
TRAF4-202ENST00000262396 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
TRAF4-202ENST00000262396 RNF186Q9NXI6 227 aa15.46■□□□□ 0.07
TRAF4-202ENST00000262396 SPEF2Q9C093 1822 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 MYH3P11055 1940 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-202ENST00000262396 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 FOXO4P98177 505 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 MKRN3Q13064 507 aaKnown RBP15.45■□□□□ 0.06
TRAF4-202ENST00000262396 MOB2Q70IA6 237 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 CSRNP1Q96S65 589 aa15.45■□□□□ 0.06
TRAF4-202ENST00000262396 SNAP23O00161 211 aa15.44■□□□□ 0.06
TRAF4-202ENST00000262396 ZNF594Q96JF6 807 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-202ENST00000262396 VEZTQ9HBM0 779 aa15.44■□□□□ 0.06
TRAF4-202ENST00000262396 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-202ENST00000262396 JAG2Q9Y219 1238 aa15.44■□□□□ 0.06
TRAF4-202ENST00000262396 POLR2AP24928 1970 aaKnown RBP15.44■□□□□ 0.06
TRAF4-202ENST00000262396 MLLT1Q03111 559 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-202ENST00000262396 ANGEL1Q9UNK9 670 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms