RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 UFL1O94874 794 aa33.64■■■□□ 2.98
SMARCD3-201ENST00000262188 SLC5A1P13866 664 aa33.64■■■□□ 2.98
SMARCD3-201ENST00000262188 TMC4Q7Z404 712 aa33.64■■■□□ 2.98
SMARCD3-201ENST00000262188 BRCA1P38398 1863 aaKnown RBP33.64■■■□□ 2.97
SMARCD3-201ENST00000262188 NDUFB9Q9Y6M9 179 aa33.63■■■□□ 2.97
SMARCD3-201ENST00000262188 GYG1P46976 350 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 UBE4AQ14139 1066 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 GORABQ5T7V8 394 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 PI4K2BQ8TCG2 481 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 STAP2Q9UGK3 403 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 LTBP1Q14766 1721 aa33.62■■■□□ 2.97
SMARCD3-201ENST00000262188 MAP4K4O95819 1239 aaPredicted RBP33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 IFIT1P09914 478 aaKnown RBP33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 PHKA1P46020 1223 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 BCAMP50895 628 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 MPNDQ8N594 471 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 TBC1D16Q8TBP0 767 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 ECHDC1Q9NTX5 307 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 GGA1Q9UJY5 639 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 DUOX1Q9NRD9 1551 aa33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 DALRD3Q5D0E6 543 aaKnown RBP33.61■■■□□ 2.97
SMARCD3-201ENST00000262188 UTRNP46939 3433 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 C6orf229H3BNL8 230 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 DPP8Q6V1X1 898 aaPredicted RBP33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 IL27Q8NEV9 243 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 PODXL2Q9NZ53 605 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 BCS1LQ9Y276 419 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 GSPT1P15170 499 aaKnown RBP33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 SYT17Q9BSW7 474 aa33.6■■■□□ 2.97
SMARCD3-201ENST00000262188 ARAP2Q8WZ64 1704 aa33.59■■■□□ 2.97
SMARCD3-201ENST00000262188 BOLA2Q9H3K6 86 aa33.59■■■□□ 2.97
SMARCD3-201ENST00000262188 TMX4Q9H1E5 349 aaPredicted RBP33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 IQSEC3Q9UPP2 1182 aaPredicted RBP33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 LEMD3Q9Y2U8 911 aa33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 IRS2Q9Y4H2 1338 aa33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 SCARF1Q14162 830 aa33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 CCDC102BQ68D86 513 aa33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 OSBPL3Q9H4L5 887 aa33.58■■■□□ 2.97
SMARCD3-201ENST00000262188 TTC22Q5TAA0 569 aa33.57■■■□□ 2.96
SMARCD3-201ENST00000262188 ATP2B4P23634 1241 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 PI16Q6UXB8 463 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 GPATCH3Q96I76 525 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 FAM84BQ96KN1 310 aaPredicted RBP33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 SNED1Q8TER0 1413 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 TTC41PQ6P2S7 1318 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 RIMBP2O15034 1052 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 TTC39AQ5SRH9 613 aa33.56■■■□□ 2.96
SMARCD3-201ENST00000262188 EDC3Q96F86 508 aaKnown RBP33.55■■■□□ 2.96
SMARCD3-201ENST00000262188 CCDC158Q5M9N0 1113 aa33.54■■■□□ 2.96
SMARCD3-201ENST00000262188 SNRKQ9NRH2 765 aa33.54■■■□□ 2.96
SMARCD3-201ENST00000262188 ATP5JP18859 108 aa33.52■■■□□ 2.96
SMARCD3-201ENST00000262188 NBR1Q14596 966 aa33.52■■■□□ 2.96
SMARCD3-201ENST00000262188 CCDC93Q567U6 631 aa33.52■■■□□ 2.96
SMARCD3-201ENST00000262188 DNAJC2Q99543 621 aaKnown RBP33.51■■■□□ 2.96
SMARCD3-201ENST00000262188 GLRX3O76003 335 aaKnown RBP33.51■■■□□ 2.95
SMARCD3-201ENST00000262188 MCAMP43121 646 aa33.51■■■□□ 2.95
SMARCD3-201ENST00000262188 ERC2O15083 957 aa33.5■■■□□ 2.95
SMARCD3-201ENST00000262188 FBXO33Q7Z6M2 555 aa33.5■■■□□ 2.95
SMARCD3-201ENST00000262188 VPS37DQ86XT2 251 aa33.5■■■□□ 2.95
SMARCD3-201ENST00000262188 AOX1Q06278 1338 aa33.5■■■□□ 2.95
SMARCD3-201ENST00000262188 CAVIN4Q5BKX8 364 aa33.49■■■□□ 2.95
SMARCD3-201ENST00000262188 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.49■■■□□ 2.95
SMARCD3-201ENST00000262188 HIBADHP31937 336 aaKnown RBP33.49■■■□□ 2.95
SMARCD3-201ENST00000262188 SDSP20132 328 aa33.48■■■□□ 2.95
SMARCD3-201ENST00000262188 RASGRF1Q13972 1273 aa33.48■■■□□ 2.95
SMARCD3-201ENST00000262188 JAG2Q9Y219 1238 aa33.48■■■□□ 2.95
SMARCD3-201ENST00000262188 TRIM6-TRIM34B2RNG4 842 aa33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 CC2D2BQ6DHV5 1058 aa33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 ARID4AP29374 1257 aaPredicted RBP33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 FKBP4Q02790 459 aaKnown RBP eCLIP33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 DOK7Q18PE1 504 aa33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 WASHC4Q2M389 1173 aa33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 RILPL2Q969X0 211 aa33.47■■■□□ 2.95
SMARCD3-201ENST00000262188 MED23Q9ULK4 1368 aa33.46■■■□□ 2.95
SMARCD3-201ENST00000262188 ANTXR1Q9H6X2 564 aa33.46■■■□□ 2.95
SMARCD3-201ENST00000262188 COL1A1P02452 1464 aaPredicted RBP33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 ZAP70P43403 619 aa33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 AOC3Q16853 763 aa33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 BMP2KLQ5H9B9 411 aa33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 RTFDC1Q9BY42 306 aaPredicted RBP33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 ZNF277Q9NRM2 450 aaPredicted RBP33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 HMG20BQ9P0W2 317 aa33.45■■■□□ 2.95
SMARCD3-201ENST00000262188 RTKN2Q8IZC4 609 aa33.45■■■□□ 2.94
SMARCD3-201ENST00000262188 HAUS7Q99871 368 aa33.45■■■□□ 2.94
SMARCD3-201ENST00000262188 ZC3H12CQ9C0D7 883 aaKnown RBP33.45■■■□□ 2.94
SMARCD3-201ENST00000262188 AKAP11Q9UKA4 1901 aa33.45■■■□□ 2.94
SMARCD3-201ENST00000262188 GLIPR1L2Q4G1C9 344 aa33.44■■■□□ 2.94
SMARCD3-201ENST00000262188 C15orf52Q6ZUT6 534 aaKnown RBP33.44■■■□□ 2.94
SMARCD3-201ENST00000262188 GOLIM4O00461 696 aa33.43■■■□□ 2.94
SMARCD3-201ENST00000262188 NFKBIEO00221 500 aa33.42■■■□□ 2.94
SMARCD3-201ENST00000262188 UQCRFS1P1P0C7P4 283 aa33.42■■■□□ 2.94
SMARCD3-201ENST00000262188 ZNF804AQ7Z570 1209 aa33.42■■■□□ 2.94
SMARCD3-201ENST00000262188 RASSF7Q02833 373 aa33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 TBC1D9Q6ZT07 1266 aa33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 SPATA5Q8NB90 893 aa33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 DBNDD1Q9H9R9 158 aa33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 CD209Q9NNX6 404 aa33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 FRAT2O75474 233 aaPredicted RBP33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 ZNF512BQ96KM6 892 aaPredicted RBP33.41■■■□□ 2.94
SMARCD3-201ENST00000262188 YBX3P16989 372 aaKnown RBP eCLIP33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms